RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	EDNRB	P24530	442 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	MNX1	P50219	401 aa	Predicted RBP	13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	NBR1	Q14596	966 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	LRRC41	Q15345	812 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	LETM2	Q2VYF4	491 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	PCNX4	Q63HM2	1172 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	SEPT14	Q6ZU15	432 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	NEK8	Q86SG6	692 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	FERMT2	Q96AC1	680 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	CHAMP1	Q96JM3	812 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	ZFP91	Q96JP5	570 aa	Predicted RBP	13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	IWS1	Q96ST2	819 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	KATNBL1	Q9H079	304 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	SPC25	Q9HBM1	224 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	VTA1	Q9NP79	307 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	NOL7	Q9UMY1	257 aa	Known RBP	13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	LRRC37A2	A6NM11	1700 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	DUSP11	O75319	330 aa	Known RBP	13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	SMPD1	P17405	629 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	CCND2	P30279	289 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	CIITA	P33076	1130 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	TRAPPC10	P48553	1259 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	USP11	P51784	963 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	ATN1	P54259	1190 aa	Predicted RBP	13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	IRX5	P78411	483 aa	Predicted RBP	13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	MRPS9	P82933	396 aa	Known RBP	13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	RILPL1	Q5EBL4	403 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	TTC38	Q5R3I4	469 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	TMEM63B	Q5T3F8	832 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	TAPT1	Q6NXT6	567 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	UBE2Q1	Q7Z7E8	422 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	RNF180	Q86T96	592 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	VSIG10L	Q86VR7	867 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	MORC4	Q8TE76	937 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	AP5M1	Q9H0R1	490 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	SYNRG	Q9UMZ2	1314 aa		13.55	□□□□□ -0.24
PVT1-215	ENST00000522963	LOC102724159	A0A0B4J2E5	919 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	MYADML2	A6NDP7	307 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	DNM1L	O00429	736 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	DYNC1LI2	O43237	492 aa	Predicted RBP	13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	TDP2	O95551	362 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	BEX3	Q00994	111 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	DNM1	Q05193	864 aa	Known RBP	13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	PWP2	Q15269	919 aa	Known RBP	13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	ZNF174	Q15697	407 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	STXBP2	Q15833	593 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	IQSEC1	Q6DN90	963 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	XRRA1	Q6P2D8	792 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	TLK2	Q86UE8	772 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	CYP2W1	Q8TAV3	490 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	VTI1A	Q96AJ9	217 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	MBOAT7	Q96N66	472 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	WDR11	Q9BZH6	1224 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	RTEL1	Q9NZ71	1219 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	PCDHB6	Q9Y5E3	794 aa		13.54	□□□□□ -0.24
PVT1-215	ENST00000522963	KIAA1217	Q5T5P2	1943 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	ALPK3	Q96L96	1907 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	FAM86B1	E9PN63	330 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	EVI5	O60447	810 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	CCNT1	O60563	726 aa	Known RBP	13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	FAM86B2	P0C5J1	330 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	CYP3A7	P24462	503 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	MCM7	P33993	719 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	ZNF76	P36508	570 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	CEP55	Q53EZ4	464 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	GNAS	Q5JWF2	1037 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	PPP4R3A	Q6IN85	833 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	MOXD1	Q6UVY6	613 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	COPS5	Q92905	334 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	TNPO1	Q92973	898 aa	Known RBP	13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	ZNF396	Q96N95	335 aa	Predicted RBP	13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	USP28	Q96RU2	1077 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	MXRA8	Q9BRK3	442 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	TFIP11	Q9UBB9	837 aa	Known RBP	13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	ATP6V1D	Q9Y5K8	247 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	UBIAD1	Q9Y5Z9	338 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	CLIC4	Q9Y696	253 aa		13.53	□□□□□ -0.24
PVT1-215	ENST00000522963	MYH7B	A7E2Y1	1941 aa		13.52	□□□□□ -0.24
PVT1-215	ENST00000522963	IGLV3-22	A0A075B6J6	115 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	SLC37A4	O43826	429 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	SORBS3	O60504	671 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	ADAMTS4	O75173	837 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	EIF3J	O75822	258 aa	Known RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	RGS20	O76081	388 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	TXN	P10599	105 aa	Known RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	GCFC2	P16383	781 aa	Known RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	ITGB5	P18084	799 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	CEBPZ	Q03701	1054 aa	Known RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	TTLL4	Q14679	1199 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	KCNA10	Q16322	511 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	C7orf61	Q8IZ16	206 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	OR6J1	Q8NGC5	347 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	SCFD2	Q8WU76	684 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	LENG9	Q96B70	501 aa		13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	INPP4A	Q96PE3	977 aa	Predicted RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	NAP1L4	Q99733	375 aa	Known RBP	13.52	□□□□□ -0.25
PVT1-215	ENST00000522963	JADE2	Q9NQC1	790 aa		13.52	□□□□□ -0.25

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