RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	CAPN6	Q9Y6Q1	641 aa		7.93	□□□□□ -1.14
EIF3E-216	ENST00000522887	ATP10D	Q9P241	1426 aa		7.93	□□□□□ -1.14
EIF3E-216	ENST00000522887	ITGB4	P16144	1822 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	MED26	O95402	600 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	ZEB1	P37275	1124 aa	Predicted RBP	7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	AIMP1	Q12904	312 aa	Known RBP	7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	BBS9	Q3SYG4	887 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	LSR	Q86X29	649 aa	Predicted RBP	7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	SPACA3	Q8IXA5	215 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	XAGE3	Q8WTP9	111 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	ASB11	Q8WXH4	323 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	HRASLS5	Q96KN8	279 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	KREMEN1	Q96MU8	473 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	PPT2	Q9UMR5	302 aa		7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	CIC	Q96RK0	1608 aa	Predicted RBP	7.92	□□□□□ -1.14
EIF3E-216	ENST00000522887	FAM155A	B1AL88	458 aa	Predicted RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	TCERG1	O14776	1098 aa	Known RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	UBOX5	O94941	541 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	HOXA10	P31260	410 aa	Predicted RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	CASP7	P55210	303 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	TNNI3K	Q59H18	835 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	CDH24	Q86UP0	819 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	CPLX3	Q8WVH0	158 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	KIF2C	Q99661	725 aa		7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	TMX4	Q9H1E5	349 aa	Predicted RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	TRIT1	Q9H3H1	467 aa	Known RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	ANGEL1	Q9UNK9	670 aa	Known RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.91	□□□□□ -1.14
EIF3E-216	ENST00000522887	KDM2B	Q8NHM5	1336 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	CLEC3A	O75596	197 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	CAMTA2	O94983	1202 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	FGR	P09769	529 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	KCNA3	P22001	575 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	GPT	P24298	496 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	AGBL5	Q8NDL9	886 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	ENOX1	Q8TC92	643 aa	Known RBP	7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	VWCE	Q96DN2	955 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	SHD	Q96IW2	340 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	BRIP1	Q9BX63	1249 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	GPR62	Q9BZJ7	368 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	SLC5A6	Q9Y289	635 aa		7.9	□□□□□ -1.14
EIF3E-216	ENST00000522887	PXDNL	A1KZ92	1463 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	CARMIL3	Q8ND23	1372 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	TMPO	P42166	694 aa	Known RBP	7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	NKPD1	Q17RQ9	610 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	FBXW10	Q5XX13	1052 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	PRR5L	Q6MZQ0	368 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	TMPRSS7	Q7RTY8	843 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	PLD6	Q8N2A8	252 aa	Known RBP	7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	FAM181A	Q8N9Y4	354 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	RIN3	Q8TB24	985 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	RPGR	Q92834	1020 aa	Known RBP	7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	ARMC5	Q96C12	935 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	RUNDC1	Q96C34	613 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	PLEKHF1	Q96S99	279 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	PHAX	Q9H814	394 aa	Known RBP	7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	NMRK2	Q9NPI5	230 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	CCDC39	Q9UFE4	941 aa		7.89	□□□□□ -1.15
EIF3E-216	ENST00000522887	COL3A1	P02461	1466 aa	Predicted RBP	7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	C10orf71	Q711Q0	1435 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	CEMIP	Q8WUJ3	1361 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	PITPNM2	Q9BZ72	1349 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	PMS1	P54277	932 aa	Known RBP	7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	EIF4A1	P60842	406 aa	Known RBP	7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	HLF	Q16534	295 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	OGFOD2	Q6N063	350 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	CLEC4G	Q6UXB4	293 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	DTWD2	Q8NBA8	298 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	MASTL	Q96GX5	879 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	SLC9A7	Q96T83	725 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	NYX	Q9GZU5	481 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	LMCD1	Q9NZU5	365 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	SUCO	Q9UBS9	1254 aa	Known RBP	7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	PLAGL2	Q9UPG8	496 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	ST14	Q9Y5Y6	855 aa		7.88	□□□□□ -1.15
EIF3E-216	ENST00000522887	TUBGCP6	Q96RT7	1819 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	ELL2	O00472	640 aa	Predicted RBP	7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	ANP32C	O43423	234 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	ANXA1	P04083	346 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	SSB	P05455	408 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	ITIH2	P19823	946 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	NAALADL2	Q58DX5	795 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	TTLL7	Q6ZT98	887 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	PPP1R42	Q7Z4L9	355 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	GPATCH2	Q9NW75	528 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	KCP	Q6ZWJ8	1503 aa		7.87	□□□□□ -1.15
EIF3E-216	ENST00000522887	QSER1	Q2KHR3	1735 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	TOMM70	O94826	608 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	ACR	P10323	421 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	SRF	P11831	508 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	NPR1	P16066	1061 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	ALDH1B1	P30837	517 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	SF3A1	Q15459	793 aa	Known RBP	7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	SOGA3	Q5TF21	947 aa		7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	ANGEL2	Q5VTE6	544 aa	Known RBP	7.86	□□□□□ -1.15
EIF3E-216	ENST00000522887	STYK1	Q6J9G0	422 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms