RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 KRT24Q2M2I5 525 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 PIGBQ92521 554 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 FGD4Q96M96 766 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 SUSD2Q9UGT4 822 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 FBXL21Q9UKT6 434 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 ST14Q9Y5Y6 855 aa8.58□□□□□ -1.04
PVT1-214ENST00000522875 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 SHISA3A0PJX4 238 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 WASH4PA8MWX3 477 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 CD247P20963 164 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
PVT1-214ENST00000522875 TWISTNBQ3B726 338 aaPredicted RBP8.57□□□□□ -1.04
PVT1-214ENST00000522875 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 HEATR6Q6AI08 1181 aaKnown RBP8.57□□□□□ -1.04
PVT1-214ENST00000522875 ZNF790Q6PG37 636 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 C8orf58Q8NAV2 365 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
PVT1-214ENST00000522875 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 MINPP1Q9UNW1 487 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 TOGARAM1Q9Y4F4 1720 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 EP400Q96L91 3159 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 ITGB4P16144 1822 aa8.57□□□□□ -1.04
PVT1-214ENST00000522875 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
PVT1-214ENST00000522875 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
PVT1-214ENST00000522875 TSPYL6Q8N831 410 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 PIWIL2Q8TC59 973 aaKnown RBP8.56□□□□□ -1.04
PVT1-214ENST00000522875 HSPA12BQ96MM6 686 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 DEPDC7Q96QD5 511 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 KLHL25Q9H0H3 589 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 CCDC113Q9H0I3 377 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 DUSP15Q9H1R2 295 aaPredicted RBP8.56□□□□□ -1.04
PVT1-214ENST00000522875 GP6Q9HCN6 339 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 GFOD1Q9NXC2 390 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 RCAN3Q9UKA8 241 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
PVT1-214ENST00000522875 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
PVT1-214ENST00000522875 PDPK1O15530 556 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 SUSD5O60279 629 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 VAMP4O75379 141 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 IFI16Q16666 785 aaKnown RBP8.55□□□□□ -1.04
PVT1-214ENST00000522875 PTF1AQ7RTS3 328 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 BRF1Q92994 677 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 MKL1Q969V6 931 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
PVT1-214ENST00000522875 APEX2Q9UBZ4 518 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 MRC1P22897 1456 aa8.55□□□□□ -1.04
PVT1-214ENST00000522875 BCL9O00512 1426 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 KDM3BQ7LBC6 1761 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 ANKRD34BA5PLL1 514 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 H3BS24 57 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 MED26O95402 600 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 PRAMEF1O95521 474 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 SRFP11831 508 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 ZNF445P59923 1031 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 NMIQ13287 307 aaPredicted RBP8.54□□□□□ -1.04
PVT1-214ENST00000522875 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 MSMPQ1L6U9 139 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 EEPD1Q7L9B9 569 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 ADAT2Q7Z6V5 191 aaKnown RBP8.54□□□□□ -1.04
PVT1-214ENST00000522875 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
PVT1-214ENST00000522875 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 GPR62Q9BZJ7 368 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 ZSWIM5Q9P217 1185 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
PVT1-214ENST00000522875 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 MEIS1O00470 390 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 ADAM23O75077 832 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
PVT1-214ENST00000522875 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
PVT1-214ENST00000522875 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
PVT1-214ENST00000522875 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 NOL9Q5SY16 702 aaKnown RBP8.53□□□□□ -1.04
PVT1-214ENST00000522875 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 ADCY4Q8NFM4 1077 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 UBE2FQ969M7 185 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 SEMA3GQ9NS98 782 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 SMC4Q9NTJ3 1288 aa8.53□□□□□ -1.04
PVT1-214ENST00000522875 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 HEG1Q9ULI3 1381 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 SIGLEC6O43699 453 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 BCAR3O75815 825 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 ITGA4P13612 1032 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 CLCN7P51798 805 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
PVT1-214ENST00000522875 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 SV2CQ496J9 727 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 DNAJC10Q8IXB1 793 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 APBA2Q99767 749 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 STK31Q9BXU1 1019 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 GBP3Q9H0R5 595 aa8.52□□□□□ -1.05
PVT1-214ENST00000522875 ASCC2Q9H1I8 757 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms