RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IGHDP01880 384 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 HOXA13P31271 388 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 PLA2G5P39877 138 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 GHRHRQ02643 423 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 HSDL1Q3SXM5 330 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 GPKOWQ92917 476 aaPredicted RBP eCLIP17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 RAD9AQ99638 391 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 PDCD2LQ9BRP1 358 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 OSBPL3Q9H4L5 887 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 BCAS3Q9H6U6 928 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 CD320Q9NPF0 282 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 KIAA1217Q5T5P2 1943 aa17.8■□□□□ 0.44
TRAPPC9-213ENST00000522504 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 ERVK-21P61565 698 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 CELF3Q5SZQ8 465 aaKnown RBP17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 STOX1Q6ZVD7 989 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 MTMR8Q96EF0 704 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 LRFN3Q9BTN0 628 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 OSBPL7Q9BZF2 842 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 DIAPH3Q9NSV4 1193 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 LAMA4Q16363 1823 aa17.79■□□□□ 0.44
TRAPPC9-213ENST00000522504 PARNO95453 639 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 NT5C2P49902 561 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 NUCB1Q02818 461 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 IKBKEQ14164 716 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 SEC23AQ15436 765 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 VSIG10LQ86VR7 867 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 SPATA33Q96N06 139 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 TGS1Q96RS0 853 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 C16orf70Q9BSU1 422 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 KATNAL1Q9BW62 490 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 AMNQ9BXJ7 453 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 C11orf16Q9NQ32 467 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
TRAPPC9-213ENST00000522504 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 PPFIA4O75335 1185 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 GGPS1O95749 300 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 UBA1P22314 1058 aaKnown RBP17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 PGM5Q15124 567 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 IMMTQ16891 758 aaKnown RBP17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 IFIT1BQ5T764 474 aaKnown RBP17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 SERINC5Q86VE9 423 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 C17orf80Q9BSJ5 609 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 LMCD1Q9NZU5 365 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
TRAPPC9-213ENST00000522504 C5orf42Q9H799 3197 aa17.77■□□□□ 0.43
TRAPPC9-213ENST00000522504 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 ZBTB5O15062 677 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 LGR5O75473 907 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 DBF4BQ8NFT6 615 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 FAM122AQ96E09 287 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 KRT23Q9C075 422 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 SENP2Q9HC62 589 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 TRIOO75962 3097 aa17.76■□□□□ 0.43
TRAPPC9-213ENST00000522504 WDFY4Q6ZS81 3184 aa17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 HOXC8P31273 242 aa17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 THPOP40225 353 aa17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 UBE2ZQ9H832 354 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 TELO2Q9Y4R8 837 aa17.75■□□□□ 0.43
TRAPPC9-213ENST00000522504 FAM86C2PA6NEL3 165 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 CYTH3O43739 400 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 EFCAB14O75071 495 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 HTRA4P83105 476 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 PLEKHG4Q58EX7 1191 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 HOMER1Q86YM7 354 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 PIGSQ96S52 555 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 CNNM2Q9H8M5 875 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 CTNNA3Q9UI47 895 aa17.74■□□□□ 0.43
TRAPPC9-213ENST00000522504 TREHO43280 583 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 SMIM10L2AP0DMW4 78 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 SMIM10L2BP0DMW5 78 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 TMEM31Q5JXX7 168 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 KCNV1Q6PIU1 500 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 MYOCDQ8IZQ8 938 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 MAP3K20Q9NYL2 800 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 TAF6LQ9Y6J9 622 aa17.73■□□□□ 0.43
TRAPPC9-213ENST00000522504 EMSYQ7Z589 1322 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 MYH7BA7E2Y1 1941 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 MYH6P13533 1939 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 C17orf102A2RUQ5 167 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 H3BRB1 525 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 GCOM1H8Y6P7 765 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 HIP1O00291 1037 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms