RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MRVI1Q9Y6F6 885 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 IVNS1ABPQ9Y6Y0 642 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 CCDC85CA6NKD9 419 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 SLC34A2O95436 690 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 CMA1P23946 247 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 UBXN2AP68543 259 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 GRB14Q14449 540 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 TMEM266Q2M3C6 531 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 PRR16Q569H4 304 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 WDR78Q5VTH9 848 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 RESP18Q5W5W9 173 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 DTHD1Q6ZMT9 781 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 GPR142Q7Z601 462 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 ETNPPLQ8TBG4 499 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 GPT2Q8TD30 523 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 AK8Q96MA6 479 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 FAM20AQ96MK3 541 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 MXRA8Q9BRK3 442 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
CPNE3-205ENST00000522240 PLXNA1Q9UIW2 1896 aa14.77□□□□□ -0.05
CPNE3-205ENST00000522240 ASTN1O14525 1302 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 VWA3AA6NCI4 1184 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 MEIS1O00470 390 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 TRAK2O60296 914 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 NR3C2P08235 984 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 MRPS9P82933 396 aaKnown RBP14.76□□□□□ -0.05
CPNE3-205ENST00000522240 CNTN2Q02246 1040 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 SHC4Q6S5L8 630 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 CCDC73Q6ZRK6 1079 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 PLEKHH3Q7Z736 793 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 VSIG10LQ86VR7 867 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 PLA2G4DQ86XP0 818 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 FSIP1Q8NA03 581 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 HAS1Q92839 578 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 GPRASP2Q96D09 838 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 CLIC6Q96NY7 704 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 INPP4AQ96PE3 977 aaPredicted RBP14.76□□□□□ -0.05
CPNE3-205ENST00000522240 PURBQ96QR8 312 aaKnown RBP14.76□□□□□ -0.05
CPNE3-205ENST00000522240 RAB34Q9BZG1 259 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 JADE2Q9NQC1 790 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 PDE4DIPQ5VU43 2346 aa14.76□□□□□ -0.05
CPNE3-205ENST00000522240 ZNFX1Q9P2E3 1918 aaKnown RBP14.75□□□□□ -0.05
CPNE3-205ENST00000522240 SOWAHBA6NEL2 793 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 SLC15A5A6NIM6 579 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 ADORA2AP29274 412 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 GRIN1Q05586 938 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 IL17AQ16552 155 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 IGSF22Q8N9C0 903 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 MORC4Q8TE76 937 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 CDHR1Q96JP9 859 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 FGD4Q96M96 766 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 HPSEQ9Y251 543 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 DIS3Q9Y2L1 958 aaKnown RBP14.75□□□□□ -0.05
CPNE3-205ENST00000522240 MGAMO43451 1857 aa14.75□□□□□ -0.05
CPNE3-205ENST00000522240 MSH4O15457 936 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 MAFGO15525 162 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 MYCLP12524 364 aaPredicted RBP14.74□□□□□ -0.05
CPNE3-205ENST00000522240 PFKFB1P16118 471 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 ITGB5P18084 799 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 TXLNAP40222 546 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 FAM160A1Q05DH4 1040 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 MTMR1Q13613 665 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 STXBP2Q15833 593 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 ZNF792Q3KQV3 632 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 GNPTABQ3T906 1256 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 NLRX1Q86UT6 975 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 SOCS4Q8WXH5 440 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 SLC5A5Q92911 643 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 MCOLN1Q9GZU1 580 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 GOLPH3LQ9H4A5 285 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
CPNE3-205ENST00000522240 TSKSQ9UJT2 592 aa14.74□□□□□ -0.05
CPNE3-205ENST00000522240 ASB14A6NK59 587 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 SLC26A4O43511 780 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 MARCH6O60337 910 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 PGK2P07205 417 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 LIG1P18858 919 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 TXKP42681 527 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 PDIA5Q14554 519 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 ENGASEQ8NFI3 743 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 CYP2W1Q8TAV3 490 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 SYMPKQ92797 1274 aaKnown RBP14.73□□□□□ -0.05
CPNE3-205ENST00000522240 SYAP1Q96A49 352 aaPredicted RBP14.73□□□□□ -0.05
CPNE3-205ENST00000522240 RIT2Q99578 217 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
CPNE3-205ENST00000522240 WDR11Q9BZH6 1224 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 TTC12Q9H892 705 aaPredicted RBP14.73□□□□□ -0.05
CPNE3-205ENST00000522240 SAGE1Q9NXZ1 904 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 SLC5A4Q9NY91 659 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 PCDHA12Q9UN75 941 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 CASP8AP2Q9UKL3 1982 aa14.73□□□□□ -0.05
CPNE3-205ENST00000522240 KIAA1217Q5T5P2 1943 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 A0A1B0GVL5 298 aa14.72□□□□□ -0.05
CPNE3-205ENST00000522240 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms