RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 MYH6P13533 1939 aa10.48□□□□□ -0.73
MRPS28-207ENST00000521434 RIF1Q5UIP0 2472 aaKnown RBP10.47□□□□□ -0.73
MRPS28-207ENST00000521434 H3BNC9 293 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 NMT2O60551 498 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 LGR5O75473 907 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 AMHP03971 560 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 CASTP20810 708 aaKnown RBP10.47□□□□□ -0.73
MRPS28-207ENST00000521434 PTK7Q13308 1070 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 GPM6BQ13491 265 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 HERC4Q5GLZ8 1057 aaPredicted RBP10.47□□□□□ -0.73
MRPS28-207ENST00000521434 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 MYOCDQ8IZQ8 938 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 C7orf31Q8N865 590 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 POP1Q99575 1024 aaKnown RBP10.47□□□□□ -0.73
MRPS28-207ENST00000521434 LRRCC1Q9C099 1032 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 NAPBQ9H115 298 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 NSUN3Q9H649 340 aaKnown RBP10.47□□□□□ -0.73
MRPS28-207ENST00000521434 CLDND1Q9NY35 253 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 HDAC6Q9UBN7 1215 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 VPS13AQ96RL7 3174 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
MRPS28-207ENST00000521434 NCK2O43639 380 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 GH1P01241 217 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 NOVP48745 357 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 PTPN5P54829 565 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 ARHGAP1Q07960 439 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 MBTPS1Q14703 1052 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 DGKDQ16760 1214 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 TRIM71Q2Q1W2 868 aaKnown RBP10.46□□□□□ -0.73
MRPS28-207ENST00000521434 ZNF618Q5T7W0 954 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 PRSS33Q8NF86 280 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 PRRX2Q99811 253 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 KATNAL1Q9BW62 490 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 ZBTB40Q9NUA8 1239 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 MUTYHQ9UIF7 546 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.46□□□□□ -0.73
MRPS28-207ENST00000521434 EMSYQ7Z589 1322 aa10.46□□□□□ -0.73
MRPS28-207ENST00000521434 COL4A6Q14031 1691 aa10.46□□□□□ -0.74
MRPS28-207ENST00000521434 KMT2EQ8IZD2 1858 aa10.46□□□□□ -0.74
MRPS28-207ENST00000521434 FRMPD2Q68DX3 1309 aaPredicted RBP10.45□□□□□ -0.74
MRPS28-207ENST00000521434 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 MS4A1P11836 297 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 LTBRP36941 435 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 PSEN2P49810 448 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 SMAD2Q15796 467 aaKnown RBP10.45□□□□□ -0.74
MRPS28-207ENST00000521434 PKN1Q16512 942 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 LY6KQ17RY6 165 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 SEPT14Q6ZU15 432 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 CHST3Q7LGC8 479 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 RPAINQ86UA6 219 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 FBXO11Q86XK2 927 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 TMEM192Q8IY95 271 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 DBF4BQ8NFT6 615 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 EDAQ92838 391 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 WNT8BQ93098 351 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 YME1L1Q96TA2 773 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 ALG1Q9BT22 464 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 GPCPD1Q9NPB8 672 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 DDX19BQ9UMR2 479 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 FAM186AA6NE01 2351 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
MRPS28-207ENST00000521434 HAS3O00219 553 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 MBTPS2O43462 519 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 SMARCA5O60264 1052 aaPredicted RBP10.44□□□□□ -0.74
MRPS28-207ENST00000521434 RANBP6O60518 1105 aaKnown RBP10.44□□□□□ -0.74
MRPS28-207ENST00000521434 F2P00734 622 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 MFSD10Q14728 455 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 CTC1Q2NKJ3 1217 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 RNF135Q8IUD6 432 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 EMID1Q96A84 441 aaPredicted RBP10.44□□□□□ -0.74
MRPS28-207ENST00000521434 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
MRPS28-207ENST00000521434 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
MRPS28-207ENST00000521434 RSPH10B2B2RC85 870 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 RSPH10BP0C881 870 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 TOP1P11387 765 aaKnown RBP10.43□□□□□ -0.74
MRPS28-207ENST00000521434 ZNF200P98182 395 aaPredicted RBP10.43□□□□□ -0.74
MRPS28-207ENST00000521434 FOXK2Q01167 660 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 CLUL1Q15846 466 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 PLEKHG4Q58EX7 1191 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
MRPS28-207ENST00000521434 PBXIP1Q96AQ6 731 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 MAF1Q9H063 256 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
MRPS28-207ENST00000521434 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
MRPS28-207ENST00000521434 TMEM221A6NGB7 291 aa10.42□□□□□ -0.74
MRPS28-207ENST00000521434 M0R296 226 aa10.42□□□□□ -0.74
MRPS28-207ENST00000521434 STXBP3O00186 592 aa10.42□□□□□ -0.74
MRPS28-207ENST00000521434 ORC4O43929 436 aa10.42□□□□□ -0.74
MRPS28-207ENST00000521434 UPP2O95045 317 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms