RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 YIPF4Q9BSR8 244 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 CHMP4AQ9BY43 222 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 SP110Q9HB58 689 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 TCF7L1Q9HCS4 588 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 OXSMQ9NWU1 459 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 X6R8D5 127 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 TRBV23OR9-2A0A075B6M9 112 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 PTPDC1A2A3K4 754 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 WTIPA6NIX2 430 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 PRPF3O43395 683 aaKnown RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 TBX4P57082 545 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 JAM2P57087 298 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 TMPRSS15P98073 1019 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 SEC23AQ15436 765 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 HHIPL2Q6UWX4 724 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 ZNF574Q6ZN55 896 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 SLCO6A1Q86UG4 719 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 OSTM1Q86WC4 334 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 KSR1Q8IVT5 923 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 ZC3H7AQ8IWR0 971 aaKnown RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 CLRN3Q8NCR9 226 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 NETO1Q8TDF5 533 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 BCL7CQ8WUZ0 217 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 USP7Q93009 1102 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 HHIPL1Q96JK4 782 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 JAM3Q9BX67 310 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 RHOBTB2Q9BYZ6 727 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 PDGFDQ9GZP0 370 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 GEMIN8Q9NWZ8 242 aaKnown RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 TIMM13Q9Y5L4 95 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P28-201ENST00000521340 TMEM265A0A087WTH1 108 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 CCDC194A0A1B0GVG4 234 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 FAM47E-STBD1D6RA91 191 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 H7BY64 318 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 FKTNO75072 461 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 FBXO21O94952 628 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 SCGB1D2O95969 90 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 PDE6AP16499 860 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 GRK2P25098 689 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 GRK3P35626 688 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 SMAD3P84022 425 aaKnown RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 ITKQ08881 620 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 SMAD2Q15796 467 aaKnown RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 IFI16Q16666 785 aaKnown RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 ANGEL2Q5VTE6 544 aaKnown RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 CYP2R1Q6VVX0 501 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 CREG2Q8IUH2 290 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 NOSTRINQ8IVI9 506 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 DLG3Q92796 817 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 RELTQ969Z4 430 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 CHMP4CQ96CF2 233 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 HOOK2Q96ED9 719 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 ASIC4Q96FT7 647 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 FCRL2Q96LA5 508 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 GPR101Q96P66 508 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 JMJD8Q96S16 334 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 ALG1Q9BT22 464 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 SLC13A1Q9BZW2 595 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 THG1LQ9NWX6 298 aaKnown RBP4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 GABBR1Q9UBS5 961 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 SPEF1Q9Y4P9 236 aa4.7□□□□□ -1.66
HMGN1P28-201ENST00000521340 MAN2B1O00754 1011 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 NKRFO15226 690 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA12O60330 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PAPLNO95428 1278 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 JUNBP17275 347 aaPredicted RBP4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 EGR3Q06889 387 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 BNIP3Q12983 259 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PIN1Q13526 163 aaPredicted RBP4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 MOGSQ13724 837 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 ARHGAP44Q17R89 818 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 ATP13A4Q4VNC1 1196 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 HSP90AB2PQ58FF8 381 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 CMIPQ8IY22 773 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 POU5F2Q8N7G0 328 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 EFHBQ8N7U6 833 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 AGBL5Q8NDL9 886 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 MTMR8Q96EF0 704 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 MAP6Q96JE9 813 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 CDADC1Q9BWV3 514 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 ZIM2Q9NZV7 527 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 SLC5A6Q9Y289 635 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA9Q9Y5G4 932 aaKnown RBP4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA8Q9Y5G5 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA7Q9Y5G6 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA3Q9Y5H0 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
HMGN1P28-201ENST00000521340 RFPL1O75677 317 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 TBC1D8O95759 1140 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 C8AP07357 584 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 ZGLP1P0C6A0 271 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 MSL3P1P0C860 447 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 ENDOUP21128 410 aaKnown RBP4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 FPR2P25090 351 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 DNM2P50570 870 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 GTF2A2P52657 109 aa4.68□□□□□ -1.66
HMGN1P28-201ENST00000521340 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms