RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
TRIM35-204ENST00000521283 ATP11BQ9Y2G3 1177 aa11.78□□□□□ -0.52
TRIM35-204ENST00000521283 ASTN1O14525 1302 aa11.78□□□□□ -0.52
TRIM35-204ENST00000521283 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-204ENST00000521283 SMPD1P17405 629 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 FGD1P98174 961 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 EXOSC10Q01780 885 aaKnown RBP11.77□□□□□ -0.53
TRIM35-204ENST00000521283 XRRA1Q6P2D8 792 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 HOMER1Q86YM7 354 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 FBXO16Q8IX29 292 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-204ENST00000521283 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
TRIM35-204ENST00000521283 FERMT2Q96AC1 680 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 PIGSQ96S52 555 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.53
TRIM35-204ENST00000521283 TRIOBPQ9H2D6 2365 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 ARVCFO00192 962 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 ZBTB43O43298 467 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 CYTH3O43739 400 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 NR3C2P08235 984 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 CLTBP09497 229 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
TRIM35-204ENST00000521283 CDK7P50613 346 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 TRIM60Q495X7 471 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 PXMP2Q9NR77 195 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 ZMYND8Q9ULU4 1186 aaPredicted RBP11.76□□□□□ -0.53
TRIM35-204ENST00000521283 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
TRIM35-204ENST00000521283 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
TRIM35-204ENST00000521283 A6NJR5 290 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 KIAA0355O15063 1070 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 RNF40O75150 1001 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 CCND2P30279 289 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 MAGEA10P43363 369 aaPredicted RBP11.75□□□□□ -0.53
TRIM35-204ENST00000521283 TLE2Q04725 743 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 TDHQ8IZJ6 230 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 EMID1Q96A84 441 aaPredicted RBP11.75□□□□□ -0.53
TRIM35-204ENST00000521283 TAAR1Q96RJ0 339 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 UBE2OQ9C0C9 1292 aaKnown RBP11.75□□□□□ -0.53
TRIM35-204ENST00000521283 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
TRIM35-204ENST00000521283 CTAGE5O15320 804 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 ADCY6O43306 1168 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
TRIM35-204ENST00000521283 GH1P01241 217 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 SYN1P17600 705 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PTPN11Q06124 597 aaPredicted RBP11.74□□□□□ -0.53
TRIM35-204ENST00000521283 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 LRIT3Q3SXY7 679 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 MCTP2Q6DN12 878 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 CCDC62Q6P9F0 684 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 TMTC3Q6ZXV5 915 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 LENG1Q96BZ8 264 aaPredicted RBP11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PURBQ96QR8 312 aaKnown RBP11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 MTG1Q9BT17 334 aaPredicted RBP11.74□□□□□ -0.53
TRIM35-204ENST00000521283 TM6SF1Q9BZW5 370 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 EHMT1Q9H9B1 1298 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 TMEM39AQ9NV64 488 aa11.74□□□□□ -0.53
TRIM35-204ENST00000521283 MYADML2A6NDP7 307 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 OPLAHO14841 1288 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 MAFGO15525 162 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 RAG1P15918 1043 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 ITGA7Q13683 1181 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 PGM5Q15124 567 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 RTN1Q16799 776 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 SKAP1Q86WV1 359 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 CDHR1Q96JP9 859 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 MTRQ99707 1265 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 KATNAL1Q9BW62 490 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 PSTPIP2Q9H939 334 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
TRIM35-204ENST00000521283 COL20A1Q9P218 1284 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 MRVI1Q9Y6F6 885 aa11.73□□□□□ -0.53
TRIM35-204ENST00000521283 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 TIMP1P01033 207 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 FOSP01100 380 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms