RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 ARIH2O95376 493 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 GH1P01241 217 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 TGFB3P10600 412 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 RPS6KB1P23443 525 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 CCND2P30279 289 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 FOXK1P85037 733 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 PGM5Q15124 567 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 RTN1Q16799 776 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 Q6ZUG5 572 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 SH3RF1Q7Z6J0 888 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 TDHQ8IZJ6 230 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
TRAPPC9-209ENST00000521167 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 MEIS2O14770 477 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 CD4P01730 458 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 MYL3P08590 195 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 RAG1P15918 1043 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 PTGS1P23219 599 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 PURAQ00577 322 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 FUT2Q10981 343 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 LAMC2Q13753 1193 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 LY6KQ17RY6 165 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 XRRA1Q6P2D8 792 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 SMARCC2Q8TAQ2 1214 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 COPS5Q92905 334 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 MTG1Q9BT17 334 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 TM6SF1Q9BZW5 370 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 MRVI1Q9Y6F6 885 aa11.98□□□□□ -0.49
TRAPPC9-209ENST00000521167 GRIN2DO15399 1336 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 CNTNAP5Q8WYK1 1306 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 hCG_1984214I3L0E3 225 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 RGS20O76081 388 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 TIMP1P01033 207 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 CPA1P15085 419 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 EVCP57679 992 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 ARHGAP1Q07960 439 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 LRIT3Q3SXY7 679 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 GNPTABQ3T906 1256 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 ZNF713Q8N859 430 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 BADQ92934 168 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 BRF1Q92994 677 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 TBX21Q9UL17 535 aa11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-209ENST00000521167 NID2Q14112 1375 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 DOCK5Q9H7D0 1870 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 CDC27P30260 824 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 ICAM3P32942 547 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 METAP2P50579 478 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 PTPN11Q06124 597 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 PCNX4Q63HM2 1172 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 NFRKBQ6P4R8 1299 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 IL31RAQ8NI17 732 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 NAP1L2Q9ULW6 460 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 CYP46A1Q9Y6A2 500 aa11.96□□□□□ -0.49
TRAPPC9-209ENST00000521167 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 SPATA31C2B4DYI2 1134 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 MMP3P08254 477 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 SUPT20HL2P0C7V6 817 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 ITGB8P26012 769 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 ADD1P35611 737 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 PSMC6P62333 389 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 MRPS9P82933 396 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 DGKDQ16760 1214 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 WWC2Q6AWC2 1192 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 MFSD5Q6N075 450 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 PPTC7Q8NI37 304 aa11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-209ENST00000521167 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms