RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SUPT20HQ8NEM7 779 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 DIS3LQ8TF46 1054 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 BRI3BPQ8WY22 251 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 RPGRQ92834 1020 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 ISL2Q96A47 359 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 RBM17Q96I25 401 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 ZC3H12CQ9C0D7 883 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 EHD4Q9H223 541 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 PIDD1Q9HB75 910 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 CACNA2D2Q9NY47 1150 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 DMDP11532 3685 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 NCANO14594 1321 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 ERVV-1B6SEH8 477 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 WNT10BO00744 389 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 PRRG2O14669 202 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 BBOX1O75936 387 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 ZBTB48P10074 688 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-208ENST00000521037 CCL5P13501 91 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 NTF4P34130 210 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 GPSM2P81274 684 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 DNAJC14Q6Y2X3 702 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-208ENST00000521037 TTLL10Q6ZVT0 673 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 FAM43AQ8N2R8 423 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 MAFAQ8NHW3 353 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-208ENST00000521037 U2AF1L4Q8WU68 220 aaKnown RBP5.18□□□□□ -1.58
VPS13B-208ENST00000521037 NPHS2Q9NP85 383 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 MYOZ2Q9NPC6 264 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 C19orf73Q9NVV2 129 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 NR2E3Q9Y5X4 410 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 MYO15AQ9UKN7 3530 aa5.18□□□□□ -1.58
VPS13B-208ENST00000521037 OTOFQ9HC10 1997 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 NPHP1O15259 732 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 SGPL1O95470 568 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 HMGB1P09429 215 aaKnown RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 GPTP24298 496 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 LACTBP83111 547 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 ORC1Q13415 861 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 KCNMB1Q16558 191 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 PRR23BQ6ZRT6 265 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 LRRC56Q8IYG6 542 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 TBC1D16Q8TBP0 767 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 STK35Q8TDR2 534 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 CELF1Q92879 486 aaKnown RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 FAM161BQ96MY7 647 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 HTATIP2Q9BUP3 242 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 MXD3Q9BW11 206 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 ANO2Q9NQ90 1003 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 ZMYND8Q9ULU4 1186 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 ZNF652Q9Y2D9 606 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 TRANK1O15050 2925 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 MAP3K15Q6ZN16 1313 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 IRS2Q9Y4H2 1338 aa5.17□□□□□ -1.58
VPS13B-208ENST00000521037 DDX60Q8IY21 1712 aaKnown RBP5.17□□□□□ -1.58
VPS13B-208ENST00000521037 TRIOO75962 3097 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 USP2O75604 605 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-208ENST00000521037 HMOX1P09601 288 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 C1QTNF9P0C862 333 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 SYN1P17600 705 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 ERVK-24P63145 666 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 ZP2Q05996 745 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 ZNF211Q13398 564 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-208ENST00000521037 GRAPQ13588 217 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 PRKG1Q13976 671 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 C17orf99Q6UX52 265 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 TOP6BLQ8N6T0 577 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 RNF214Q8ND24 703 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 AGBL3Q8NEM8 1001 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 GRAPLQ8TC17 118 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-208ENST00000521037 ASB11Q8WXH4 323 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 MYLIPQ8WY64 445 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 FAM129BQ96TA1 746 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 NYXQ9GZU5 481 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 LMCD1Q9NZU5 365 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 PCDHAC2Q9Y5I4 1007 aa5.16□□□□□ -1.58
VPS13B-208ENST00000521037 KMT2BQ9UMN6 2715 aaPredicted RBP5.15□□□□□ -1.58
VPS13B-208ENST00000521037 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
VPS13B-208ENST00000521037 CPNE3O75131 537 aaKnown RBP5.15□□□□□ -1.59
VPS13B-208ENST00000521037 GLI1P08151 1106 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 ZSCAN22P10073 491 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-208ENST00000521037 ITIH2P19823 946 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 ARHGAP4P98171 946 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 RING1Q06587 406 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 MOGSQ13724 837 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 DACT2Q5SW24 774 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 SYDE1Q6ZW31 735 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-208ENST00000521037 TTC5Q8N0Z6 440 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 CCDC74AQ96AQ1 378 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 PAWRQ96IZ0 340 aaKnown RBP5.15□□□□□ -1.59
VPS13B-208ENST00000521037 LRFN3Q9BTN0 628 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 SRRDQ9UH36 339 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 RIPOR2Q9Y4F9 1068 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 PFASO15067 1338 aa5.15□□□□□ -1.59
VPS13B-208ENST00000521037 CFAP47Q6ZTR5 3102 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 TLR2O60603 784 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 ICMTO60725 284 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 SASH1O94885 1247 aa5.14□□□□□ -1.59
VPS13B-208ENST00000521037 SNRPA1P09661 255 aaKnown RBP5.14□□□□□ -1.59
VPS13B-208ENST00000521037 GRK4P32298 578 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms