RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 UBA1P22314 1058 aaKnown RBP18.26■□□□□ 0.51
CLN8-205ENST00000520991 LIFRP42702 1097 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 MFSD10Q14728 455 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 KIAA0753Q2KHM9 967 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 CAGE1Q8TC20 777 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 FTOQ9C0B1 505 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLN8-205ENST00000520991 MLXIPQ9HAP2 919 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 TANC1Q9C0D5 1861 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 PPFIA4O75335 1185 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 STAM2O75886 525 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 ATP2A2P16615 1042 aaKnown RBP18.25■□□□□ 0.51
CLN8-205ENST00000520991 COL9A3Q14050 684 aaPredicted RBP18.25■□□□□ 0.51
CLN8-205ENST00000520991 HSDL1Q3SXM5 330 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 RAB11FIP4Q86YS3 637 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 SRBD1Q8N5C6 995 aaKnown RBP18.25■□□□□ 0.51
CLN8-205ENST00000520991 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 VWCEQ96DN2 955 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
CLN8-205ENST00000520991 NKX2-4Q9H2Z4 354 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 SLC28A3Q9HAS3 691 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 GTF2IRD1Q9UHL9 959 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 MYH7BA7E2Y1 1941 aa18.25■□□□□ 0.51
CLN8-205ENST00000520991 RABGGTBP53611 331 aa18.24■□□□□ 0.51
CLN8-205ENST00000520991 SP2Q02086 613 aa18.24■□□□□ 0.51
CLN8-205ENST00000520991 USP17L6PQ6QN14 398 aa18.24■□□□□ 0.51
CLN8-205ENST00000520991 CMTR1Q8N1G2 835 aaKnown RBP18.24■□□□□ 0.51
CLN8-205ENST00000520991 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
CLN8-205ENST00000520991 YBX2Q9Y2T7 364 aaKnown RBP18.24■□□□□ 0.51
CLN8-205ENST00000520991 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
CLN8-205ENST00000520991 HOXD8P13378 290 aaPredicted RBP18.23■□□□□ 0.51
CLN8-205ENST00000520991 MRPS9P82933 396 aaKnown RBP18.23■□□□□ 0.51
CLN8-205ENST00000520991 SYNE3Q6ZMZ3 975 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 PRDM12Q9H4Q4 367 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 RTEL1Q9NZ71 1219 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 GBF1Q92538 1859 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 HAS3O00219 553 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 NOP56O00567 594 aaKnown RBP18.23■□□□□ 0.51
CLN8-205ENST00000520991 FIBPO43427 364 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 CDC45O75419 566 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 SELPP16109 830 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 NEDD9Q14511 834 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 PPP2R2DQ66LE6 453 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 LRRC8DQ7L1W4 858 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
CLN8-205ENST00000520991 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
CLN8-205ENST00000520991 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 MEIS2O14770 477 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 ICAM3P32942 547 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 PTK7Q13308 1070 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
CLN8-205ENST00000520991 SLC9A7Q96T83 725 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 PSTPIP2Q9H939 334 aa18.22■□□□□ 0.51
CLN8-205ENST00000520991 hCG_1642624A0A1W2PR95 340 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 BAIAP3O94812 1187 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 PARNO95453 639 aaKnown RBP18.21■□□□□ 0.51
CLN8-205ENST00000520991 CKBP12277 381 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 MYOGP15173 224 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 RBL2Q08999 1139 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 METTL7BQ6UX53 244 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 CYFIP1Q7L576 1253 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 HEATR3Q7Z4Q2 680 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
CLN8-205ENST00000520991 H3BRB1 525 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 LGALS2P05162 132 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 KCNJ6P48051 423 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 ZNF200P98182 395 aaPredicted RBP18.2■□□□□ 0.5
CLN8-205ENST00000520991 NLRX1Q86UT6 975 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 PHOSPHO2Q8TCD6 241 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 TCEANC2Q96MN5 208 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
CLN8-205ENST00000520991 BCAS3Q9H6U6 928 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 RBM28Q9NW13 759 aaKnown RBP18.2■□□□□ 0.5
CLN8-205ENST00000520991 TRIP12Q14669 1992 aaPredicted RBP18.2■□□□□ 0.5
CLN8-205ENST00000520991 CHD7Q9P2D1 2997 aa18.2■□□□□ 0.5
CLN8-205ENST00000520991 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 SPDYE3A6NKU9 549 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 IGFBP4P22692 258 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 SEMA3FQ13275 785 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 KRT32Q14532 448 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 UBE2SQ16763 222 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
CLN8-205ENST00000520991 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
CLN8-205ENST00000520991 USP26Q9BXU7 913 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms