RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 DHX37Q8IY37 1157 aaKnown RBP17.21■□□□□ 0.35
FBXO28-204ENST00000519894 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
FBXO28-204ENST00000519894 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 ACRP10323 421 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 CYP2C9P11712 490 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 PTPN11Q06124 597 aaPredicted RBP17.2■□□□□ 0.34
FBXO28-204ENST00000519894 DGKDQ16760 1214 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 TMEM240Q5SV17 173 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
FBXO28-204ENST00000519894 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 RNPC3Q96LT9 517 aaKnown RBP17.2■□□□□ 0.34
FBXO28-204ENST00000519894 PSTPIP2Q9H939 334 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 RTEL1Q9NZ71 1219 aa17.2■□□□□ 0.34
FBXO28-204ENST00000519894 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
FBXO28-204ENST00000519894 SORBS3O60504 671 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 STAM2O75886 525 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 GGPS1O95749 300 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
FBXO28-204ENST00000519894 ICAM3P32942 547 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 RCAN1P53805 252 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 CCL23P55773 120 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 SEMA3FQ13275 785 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 HSDL1Q3SXM5 330 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 DEFB123Q8N688 67 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 INPP4AQ96PE3 977 aaPredicted RBP17.19■□□□□ 0.34
FBXO28-204ENST00000519894 WNT8AQ9H1J5 351 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
FBXO28-204ENST00000519894 V9GY48 417 aaPredicted RBP17.19■□□□□ 0.34
FBXO28-204ENST00000519894 SPATA31C2B4DYI2 1134 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 HOXD8P13378 290 aaPredicted RBP17.18■□□□□ 0.34
FBXO28-204ENST00000519894 RPS6KB1P23443 525 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
FBXO28-204ENST00000519894 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 FGD1P98174 961 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 UBE2SQ16763 222 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 HEATR3Q7Z4Q2 680 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 FBXL16Q8N461 479 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 BRF1Q92994 677 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 IL23AQ9NPF7 189 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 MTMR10Q9NXD2 777 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 SZT2Q5T011 3432 aa17.18■□□□□ 0.34
FBXO28-204ENST00000519894 HAS3O00219 553 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 PSEN2P49810 448 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
FBXO28-204ENST00000519894 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 FAM109BQ6ICB4 259 aaPredicted RBP17.17■□□□□ 0.34
FBXO28-204ENST00000519894 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 SESTD1Q86VW0 696 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 VWCEQ96DN2 955 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 SCLYQ96I15 445 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 MLXIPQ9HAP2 919 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 METRNQ9UJH8 293 aa17.17■□□□□ 0.34
FBXO28-204ENST00000519894 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
FBXO28-204ENST00000519894 FIBPO43427 364 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 F2P00734 622 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 ZNF286BP0CG31 522 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 PSMA5P28066 241 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
FBXO28-204ENST00000519894 GDF6Q6KF10 455 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-204ENST00000519894 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
FBXO28-204ENST00000519894 CTAGE1Q96RT6 745 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 ALG1Q9BT22 464 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 HDAC6Q9UBN7 1215 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 LAMA3Q16787 3333 aa17.16■□□□□ 0.34
FBXO28-204ENST00000519894 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
FBXO28-204ENST00000519894 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
FBXO28-204ENST00000519894 STXBP3O00186 592 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 NAPAP54920 295 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 NEDD9Q14511 834 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 MFSD10Q14728 455 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 PTGISQ16647 500 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 KIAA0753Q2KHM9 967 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 C16orf70Q9BSU1 422 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 KATNAL1Q9BW62 490 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 GTF2IRD1Q9UHL9 959 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 NID2Q14112 1375 aa17.15■□□□□ 0.34
FBXO28-204ENST00000519894 DOCK5Q9H7D0 1870 aa17.14■□□□□ 0.33
FBXO28-204ENST00000519894 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
FBXO28-204ENST00000519894 FGBP02675 491 aa17.14■□□□□ 0.33
FBXO28-204ENST00000519894 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
FBXO28-204ENST00000519894 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
FBXO28-204ENST00000519894 PPP1R18Q6NYC8 613 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms