RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.25
HPS4-218ENST00000519774 CTAGE5O15320 804 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 FIBPO43427 364 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 GGPS1O95749 300 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 ITGB5P18084 799 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 UBA1P22314 1058 aaKnown RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 CST5P28325 142 aaPredicted RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 RGS19P49795 217 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 KCNA10Q16322 511 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 KRT40Q6A162 431 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 KCNV1Q6PIU1 500 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 UBE2Q1Q7Z7E8 422 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
HPS4-218ENST00000519774 Q9Y3F1 56 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 UBIAD1Q9Y5Z9 338 aa13.51□□□□□ -0.25
HPS4-218ENST00000519774 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 KRT2P35908 639 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 ACLYP53396 1101 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
HPS4-218ENST00000519774 SP2Q02086 613 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 MTMR1Q13613 665 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 DHX37Q8IY37 1157 aaKnown RBP13.5□□□□□ -0.25
HPS4-218ENST00000519774 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
HPS4-218ENST00000519774 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
HPS4-218ENST00000519774 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
HPS4-218ENST00000519774 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 M0R2N6 131 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 ZEB2O60315 1214 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 MMP1P03956 469 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 ASGR1P07306 291 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 MYL3P08590 195 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 TGFB3P10600 412 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 COL6A1P12109 1028 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 GJB2P29033 226 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 ICAM3P32942 547 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 CPT1AP50416 773 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 SP4Q02446 784 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 NR5A1Q13285 461 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
HPS4-218ENST00000519774 INF2Q27J81 1249 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
HPS4-218ENST00000519774 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
HPS4-218ENST00000519774 PLA2G4DQ86XP0 818 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
HPS4-218ENST00000519774 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 VTI1AQ96AJ9 217 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
HPS4-218ENST00000519774 HTATIP2Q9BUP3 242 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 BRCA2P51587 3418 aa13.49□□□□□ -0.25
HPS4-218ENST00000519774 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 MOXD2PA6NHM9 499 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
HPS4-218ENST00000519774 MMP3P08254 477 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 CYP3A4P08684 503 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 ARP10275 920 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 NKX3-2P78367 333 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 NEDD9Q14511 834 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
HPS4-218ENST00000519774 CELF3Q5SZQ8 465 aaKnown RBP13.48□□□□□ -0.25
HPS4-218ENST00000519774 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 GLT1D1Q96MS3 346 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 SPATA33Q96N06 139 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 STARD7Q9NQZ5 370 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
HPS4-218ENST00000519774 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
HPS4-218ENST00000519774 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
HPS4-218ENST00000519774 NOP56O00567 594 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms