RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NFIBO00712 420 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 SPATA31C1P0DKV0 1188 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 CCNE1P24864 410 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 RPA1P27694 616 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 GHRHRQ02643 423 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 EHHADHQ08426 723 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 KCNJ12Q14500 433 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 SUPT20HL1Q3ZLR7 823 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 MCF2L2Q86YR7 1114 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 P2RX5Q93086 422 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 SLC39A2Q9NP94 309 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 ZHX2Q9Y6X8 837 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 PLA2G4BP0C869 781 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 ALAS1P13196 640 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 CEP55Q53EZ4 464 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 DNTTIP2Q5QJE6 756 aaKnown RBP20.62■□□□□ 0.89
FAM49B-214ENST00000519540 DUSP9Q99956 384 aaKnown RBP20.62■□□□□ 0.89
FAM49B-214ENST00000519540 SYT17Q9BSW7 474 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 THAP9Q9H5L6 903 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 PITPNM2Q9BZ72 1349 aa20.62■□□□□ 0.89
FAM49B-214ENST00000519540 POLR2AP24928 1970 aaKnown RBP20.62■□□□□ 0.89
FAM49B-214ENST00000519540 BICDL2A1A5D9 508 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 IDEP14735 1019 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 PBX1P40424 430 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 PSMD2Q13200 908 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 ANKRD20A12PQ8NF67 263 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 TRIM47Q96LD4 638 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 SRRTQ9BXP5 876 aaKnown RBP20.61■□□□□ 0.89
FAM49B-214ENST00000519540 BMP2KQ9NSY1 1161 aaPredicted RBP20.61■□□□□ 0.89
FAM49B-214ENST00000519540 RNF181Q9P0P0 153 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 POTEFA5A3E0 1075 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 MEIS1O00470 390 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 ZBED4O75132 1171 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
FAM49B-214ENST00000519540 POTEIP0CG38 1075 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 FDX1P10109 184 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
FAM49B-214ENST00000519540 ANKRD40Q6AI12 368 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 POTEGQ6S5H5 508 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 SLC5A5Q92911 643 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 TMX1Q9H3N1 280 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 COL20A1Q9P218 1284 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 PNMA2Q9UL42 364 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 RABGAP1Q9Y3P9 1069 aa20.61■□□□□ 0.89
FAM49B-214ENST00000519540 PHIPQ8WWQ0 1821 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 VWA5AO00534 786 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 PSMD10O75832 226 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 COPB1P53618 953 aaKnown RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 MUM1L1Q5H9M0 696 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 OTOP1Q7RTM1 612 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 ADARB2Q9NS39 739 aaKnown RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 UTRNP46939 3433 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 RPTORQ8N122 1335 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 PARP14Q460N5 1801 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 EML1O00423 815 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 NRDCO43847 1150 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 HMGCS2P54868 508 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 SAMD3Q8N6K7 520 aa20.6■□□□□ 0.89
FAM49B-214ENST00000519540 POLR3CQ9BUI4 534 aaPredicted RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 MAP3K20Q9NYL2 800 aaKnown RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
FAM49B-214ENST00000519540 N4BP3O15049 544 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 CYP11B2P19099 503 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 EEF1GP26641 437 aaKnown RBP20.59■□□□□ 0.89
FAM49B-214ENST00000519540 SLC12A3P55017 1021 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 PSMC6P62333 389 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 GOLGA8FQ08AF8 430 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 GOLGA8DPQ0D2H9 430 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 LRCH2Q5VUJ6 765 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 GPBP1Q86WP2 473 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 GUF1Q8N442 669 aaKnown RBP20.59■□□□□ 0.89
FAM49B-214ENST00000519540 CSGALNACT2Q8N6G5 542 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 CCDC112Q8NEF3 446 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■■■□□ 15.6
FAM49B-214ENST00000519540 ATG4CQ96DT6 458 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 ZFP91Q96JP5 570 aaPredicted RBP20.59■□□□□ 0.89
FAM49B-214ENST00000519540 EIF2AK1Q9BQI3 630 aaKnown RBP20.59■□□□□ 0.89
FAM49B-214ENST00000519540 VPS16Q9H269 839 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 KCND1Q9NSA2 647 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 PANK4Q9NVE7 773 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 DNM3Q9UQ16 869 aa20.59■□□□□ 0.89
FAM49B-214ENST00000519540 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
FAM49B-214ENST00000519540 USP2O75604 605 aaPredicted RBP20.58■□□□□ 0.89
FAM49B-214ENST00000519540 KCNJ6P48051 423 aa20.58■□□□□ 0.89
FAM49B-214ENST00000519540 SETQ01105 290 aaPredicted RBP20.58■□□□□ 0.89
FAM49B-214ENST00000519540 COASYQ13057 564 aa20.58■□□□□ 0.89
FAM49B-214ENST00000519540 PPP2R5CQ13362 524 aa20.58■□□□□ 0.89
FAM49B-214ENST00000519540 TC2NQ8N9U0 490 aa20.58■□□□□ 0.89
FAM49B-214ENST00000519540 MXRA8Q9BRK3 442 aa20.58■□□□□ 0.89
FAM49B-214ENST00000519540 ARP10275 920 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms