RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PRUNE2Q8WUY3 3088 aa12.58□□□□□ -0.4
PVT1-208ENST00000519481 EFCAB14O75071 495 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 STAM2O75886 525 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 CA3P07451 260 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 ZNF286BP0CG31 522 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 GNAQP50148 359 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
PVT1-208ENST00000519481 RBL2Q08999 1139 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 TROAPQ12815 778 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 MAP4K1Q92918 833 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 CUL5Q93034 780 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 RRP36Q96EU6 259 aaKnown RBP12.57□□□□□ -0.4
PVT1-208ENST00000519481 ZBED2Q9BTP6 218 aa12.57□□□□□ -0.4
PVT1-208ENST00000519481 SEC63Q9UGP8 760 aaKnown RBP12.57□□□□□ -0.4
PVT1-208ENST00000519481 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
PVT1-208ENST00000519481 SCN5AQ14524 2016 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 HAS3O00219 553 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
PVT1-208ENST00000519481 TLL1O43897 1013 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 SORBS3O60504 671 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 DDAH1O94760 285 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 CKBP12277 381 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
PVT1-208ENST00000519481 SKIV2LQ15477 1246 aaKnown RBP12.56□□□□□ -0.4
PVT1-208ENST00000519481 NFXL1Q6ZNB6 911 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 SMARCC2Q8TAQ2 1214 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 MAP3K14Q99558 947 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 PRDM6Q9NQX0 595 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 EYSQ5T1H1 3165 aa12.56□□□□□ -0.4
PVT1-208ENST00000519481 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
PVT1-208ENST00000519481 GBF1Q92538 1859 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 ABHD14A-ACY1A0A1B0GW23 586 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 CCDC69A6NI79 296 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 CYTH3O43739 400 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 RGS20O76081 388 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
PVT1-208ENST00000519481 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
PVT1-208ENST00000519481 MCM5P33992 734 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 IKBKEQ14164 716 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 NEDD9Q14511 834 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 AAK1Q2M2I8 961 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 HSDL1Q3SXM5 330 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 MB21D2Q8IYB1 491 aaPredicted RBP12.55□□□□□ -0.4
PVT1-208ENST00000519481 ZNF654Q8IZM8 581 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 IL31RAQ8NI17 732 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 ARNTL2Q8WYA1 636 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 DHX38Q92620 1227 aaKnown RBP12.55□□□□□ -0.4
PVT1-208ENST00000519481 ASB2Q96Q27 587 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 CERS4Q9HA82 394 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 SENP2Q9HC62 589 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
PVT1-208ENST00000519481 TANC1Q9C0D5 1861 aa12.55□□□□□ -0.4
PVT1-208ENST00000519481 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 H3BRB1 525 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 FIBPO43427 364 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 PRC1O43663 620 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 CXCL10P02778 98 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 CALM1P0DP23 149 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 CALM2P0DP24 149 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 CALM3P0DP25 149 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 GNAT1P11488 350 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 WDR5P61964 334 aaKnown RBP12.54□□□□□ -0.4
PVT1-208ENST00000519481 TAP1Q03518 808 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 SLC35G1Q2M3R5 365 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 XRRA1Q6P2D8 792 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
PVT1-208ENST00000519481 TMEM87BQ96K49 555 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
PVT1-208ENST00000519481 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
PVT1-208ENST00000519481 TNFRSF10AO00220 468 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 NBNO60934 754 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 POU3F3P20264 500 aaPredicted RBP12.53□□□□□ -0.4
PVT1-208ENST00000519481 ICAM3P32942 547 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 THPOP40225 353 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 ANTXR2P58335 489 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 SP2Q02086 613 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 ZNF618Q5T7W0 954 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 NLRX1Q86UT6 975 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 ATP6V0A1Q93050 837 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
PVT1-208ENST00000519481 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms