RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ELP1O95163 1332 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 MEIS2O14770 477 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 CTAGE5O15320 804 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 DYNC1LI2O43237 492 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 ARIH2O95376 493 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SCG2P13521 617 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 ADCY7P51828 1080 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 STXBP2Q15833 593 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 PKN1Q16512 942 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 PFKFB3Q16875 520 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 LRRC26Q2I0M4 334 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 IQSEC1Q6DN90 963 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 RNF180Q86T96 592 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SAMD3Q8N6K7 520 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SCFD2Q8WU76 684 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SPOCK2Q92563 424 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 PGBD1Q96JS3 809 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 C8orf76Q96K31 380 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 UPF3AQ9H1J1 476 aaKnown RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SPC25Q9HBM1 224 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 BARHL2Q9NY43 387 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 GNEQ9Y223 722 aaKnown RBP8.66□□□□□ -1.02
SDCBP-206ENST00000519115 SCN10AQ9Y5Y9 1956 aa8.66□□□□□ -1.02
SDCBP-206ENST00000519115 FRMPD4Q14CM0 1322 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 A0A1W2PQ45 241 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-206ENST00000519115 A0A1W2PQY0 241 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 RBM47A0AV96 593 aaKnown RBP8.65□□□□□ -1.02
SDCBP-206ENST00000519115 PIK3CDO00329 1044 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 ADAMTS3O15072 1205 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 EVI5O60447 810 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 SORBS3O60504 671 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 JAK2O60674 1132 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 TXNP10599 105 aaKnown RBP8.65□□□□□ -1.02
SDCBP-206ENST00000519115 CST5P28325 142 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-206ENST00000519115 CCND2P30279 289 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 ACLYP53396 1101 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 GJA9P57773 515 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 TTLL4Q14679 1199 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 KCNA10Q16322 511 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 DUSP28Q4G0W2 176 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 PPP1R18Q6NYC8 613 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 KLHDC9Q8NEP7 349 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 OR6J1Q8NGC5 347 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-206ENST00000519115 AIFM3Q96NN9 605 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 RIC8AQ9NPQ8 531 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 TMEM260Q9NX78 707 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 VPS54Q9P1Q0 977 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 LTBP2Q14767 1821 aa8.65□□□□□ -1.02
SDCBP-206ENST00000519115 TRIP12Q14669 1992 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 WDR81Q562E7 1941 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 ESYT2A0FGR8 921 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 SMCO2A6NFE2 343 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 H0YGN5 161 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 EIF3JO75822 258 aaKnown RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 RGS20O76081 388 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 ASGR1P07306 291 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 RTP1P59025 263 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 KRT85P78386 507 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 MRPS9P82933 396 aaKnown RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 LY6KQ17RY6 165 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 CCSAPQ6IQ19 270 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 CCDC62Q6P9F0 684 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 CXCL17Q6UXB2 119 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 RASGRP4Q8TDF6 673 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 VTI1AQ96AJ9 217 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 RTEL1Q9NZ71 1219 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 RCOR1Q9UKL0 485 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-206ENST00000519115 PCDHA6Q9UN73 950 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 ATP11BQ9Y2G3 1177 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 PCDHA8Q9Y5H6 950 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
SDCBP-206ENST00000519115 TRIOBPQ9H2D6 2365 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 KAT6AQ92794 2004 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.033e-7■■■■□ 24.1
SDCBP-206ENST00000519115 BMP15O95972 392 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 MBD3O95983 291 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 GH1P01241 217 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 MMP1P03956 469 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 MYL3P08590 195 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 SYN1P17600 705 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 NCLP19338 710 aaKnown RBP8.63□□□□□ -1.03
SDCBP-206ENST00000519115 GNA11P29992 359 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms