RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 UBA1P22314 1058 aaKnown RBP25.13■■□□□ 1.61
VEGFA-217ENST00000518538 SNX17Q15036 470 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 GALNT17Q6IS24 598 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 CCDC83Q8IWF9 413 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 DAGLBQ8NCG7 672 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 GPRASP2Q96D09 838 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 STARD7Q9NQZ5 370 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 PCDHA4Q9UN74 947 aa25.13■■□□□ 1.61
VEGFA-217ENST00000518538 ELP1O95163 1332 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 ALPK3Q96L96 1907 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 ITGB5P18084 799 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 SP2Q02086 613 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 SEMA3FQ13275 785 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 LAMC2Q13753 1193 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 C1orf53Q5VUE5 145 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 DHX37Q8IY37 1157 aaKnown RBP25.12■■□□□ 1.61
VEGFA-217ENST00000518538 ALG1Q9BT22 464 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 POLR3EQ9NVU0 708 aa25.12■■□□□ 1.61
VEGFA-217ENST00000518538 JAK2O60674 1132 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 ARHGAP4P98171 946 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 CELF3Q5SZQ8 465 aaKnown RBP25.11■■□□□ 1.61
VEGFA-217ENST00000518538 CXCL17Q6UXB2 119 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 RASGRP4Q8TDF6 673 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 AFG1LQ8WV93 481 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 CDHR1Q96JP9 859 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 LLPHQ9BRT6 129 aaKnown RBP25.11■■□□□ 1.61
VEGFA-217ENST00000518538 PHF20Q9BVI0 1012 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 JADE2Q9NQC1 790 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 NR2E3Q9Y5X4 410 aa25.11■■□□□ 1.61
VEGFA-217ENST00000518538 KPNA6O60684 536 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 GGPS1O95749 300 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 MCM2P49736 904 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 RTP1P59025 263 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 MTMR1Q13613 665 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 NPY5RQ15761 445 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 MYSM1Q5VVJ2 828 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 BLIDQ8IZY5 108 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 CRYGNQ8WXF5 182 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 SENP7Q9BQF6 1050 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 MXRA8Q9BRK3 442 aa25.1■■□□□ 1.61
VEGFA-217ENST00000518538 A0A0U1RQG5 324 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-217ENST00000518538 M0R2N6 131 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 MAFGO15525 162 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 MMP3P08254 477 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 CYP3A4P08684 503 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 PURAQ00577 322 aaKnown RBP25.09■■□□□ 1.61
VEGFA-217ENST00000518538 NEDD9Q14511 834 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 C7orf61Q8IZ16 206 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 PPTC7Q8NI37 304 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 VTI1AQ96AJ9 217 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 KCNJ14Q9UNX9 436 aa25.09■■□□□ 1.61
VEGFA-217ENST00000518538 CD2BP2O95400 341 aaKnown RBP25.08■■□□□ 1.61
VEGFA-217ENST00000518538 MYL3P08590 195 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 TRIM60Q495X7 471 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 CEP55Q53EZ4 464 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 SPATA33Q96N06 139 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 MLXIPQ9HAP2 919 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 ATP11BQ9Y2G3 1177 aa25.08■■□□□ 1.61
VEGFA-217ENST00000518538 METTL7BQ6UX53 244 aa25.07■■□□□ 1.6
VEGFA-217ENST00000518538 NIPA1Q7RTP0 329 aa25.07■■□□□ 1.6
VEGFA-217ENST00000518538 GIMAP8Q8ND71 665 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-217ENST00000518538 MTG1Q9BT17 334 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-217ENST00000518538 GJB4Q9NTQ9 266 aa25.07■■□□□ 1.6
VEGFA-217ENST00000518538 SORBS3O60504 671 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 KCNA2P16389 499 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 ZNF76P36508 570 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 HMGN5P82970 282 aaKnown RBP25.06■■□□□ 1.6
VEGFA-217ENST00000518538 DGKDQ16760 1214 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 CYP2W1Q8TAV3 490 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 TMX3Q96JJ7 454 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 KCNH7Q9NS40 1196 aa25.06■■□□□ 1.6
VEGFA-217ENST00000518538 PDE4DIPQ5VU43 2346 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 ARVCFO00192 962 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 MEIS1O00470 390 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 HOXD8P13378 290 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-217ENST00000518538 CDK7P50613 346 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 ITGA7Q13683 1181 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 HSDL1Q3SXM5 330 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 CYFIP1Q7L576 1253 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 ANKRD33Q7Z3H0 272 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 SEZ6LQ9BYH1 1024 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 BCAS3Q9H6U6 928 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 MROH7Q68CQ1 1323 aa25.05■■□□□ 1.6
VEGFA-217ENST00000518538 FAM86B1E9PN63 330 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 H0YGN5 161 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 ATP9AO75110 1047 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 FAM86B2P0C5J1 330 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 CIITAP33076 1130 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 PSMC6P62333 389 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 PRPF38BQ5VTL8 546 aaKnown RBP25.04■■□□□ 1.6
VEGFA-217ENST00000518538 KRT25Q7Z3Z0 450 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 SLC43A3Q8NBI5 491 aa25.04■■□□□ 1.6
VEGFA-217ENST00000518538 NOP56O00567 594 aaKnown RBP25.03■■□□□ 1.6
VEGFA-217ENST00000518538 PQBP1O60828 265 aaKnown RBP25.03■■□□□ 1.6
VEGFA-217ENST00000518538 PPFIA4O75335 1185 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 USP11P51784 963 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 TLE2Q04725 743 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 TRIM29Q14134 588 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 TBCKQ8TEA7 893 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 TOX2Q96NM4 488 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms