RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 BIN2Q9UBW5 565 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 SSU72P8A0A1W2PR75 194 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 KLRF2D3W0D1 207 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 RPSAP08865 295 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 GFPT1Q06210 699 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 GRIPAP1Q4V328 841 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 GIMAP8Q8ND71 665 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 CAVIN3Q969G5 261 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 HVCN1Q96D96 273 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 RUNDC3BQ96NL0 473 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 HSD3B7Q9H2F3 369 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 METTL14Q9HCE5 456 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 HDAC9Q9UKV0 1011 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 HIP1RO75146 1068 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 ELF1P32519 619 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 PDXDC1Q6P996 788 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 VSIG1Q86XK7 387 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 AENQ8WTP8 325 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 ERGIC2Q96RQ1 377 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 EPB41L4AQ9HCS5 686 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 RYDENQ9NUL5 291 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 KLHL14Q9P2G3 628 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 SUFUQ9UMX1 484 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 DAAM1Q9Y4D1 1078 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 XDHP47989 1333 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 XRN1Q8IZH2 1706 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 CPP00450 1065 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 GYG1P46976 350 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ACTN3Q08043 901 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 TTLL12Q14166 644 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ZKSCAN8Q15776 578 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 FIGNQ5HY92 759 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ANKRD40Q6AI12 368 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 NEK9Q8TD19 979 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 FMO2Q99518 471 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 CTTNBP2NLQ9P2B4 639 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 FRMD4BQ9Y2L6 1034 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SMTNP53814 917 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 DYNLL1P63167 89 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SKOR1P84550 965 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SWT1Q5T5J6 900 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SH3RF1Q7Z6J0 888 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 GPBP1Q86WP2 473 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC105Q8IYK2 499 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 FAM133AQ8N9E0 248 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 RNPC3Q96LT9 517 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SPATS2LQ9NUQ6 558 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 CTDP1Q9Y5B0 961 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ERVV-1B6SEH8 477 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 MYO1FO00160 1098 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 SPOPO43791 374 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 KRT14P02533 472 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 FERP16591 822 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 AMPD2Q01433 879 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF804AQ7Z570 1209 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 DGKHQ86XP1 1220 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 GUF1Q8N442 669 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 TRIM6Q9C030 488 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 EHMT1Q9H9B1 1298 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ADAMTS1Q9UHI8 967 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 UBE2Q2LH0YL09 131 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ATP2A1O14983 1001 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 HSPA6P17066 643 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 PBX1P40424 430 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 RASSF2P50749 326 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 TNIP1Q15025 636 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF662Q6ZS27 426 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 GBP7Q8N8V2 638 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 PPFIBP2Q8ND30 876 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 NYXQ9GZU5 481 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 VCXQ9H320 206 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 NOP53Q9NZM5 478 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 STK38LQ9Y2H1 464 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 DIS3Q9Y2L1 958 aaKnown RBP7.28□□□□□ -1.24
CPNE3-203ENST00000517490 ATP6V0A2Q9Y487 856 aa7.28□□□□□ -1.24
CPNE3-203ENST00000517490 CYP2D7A0A087X1C5 515 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 FRMD3A2A2Y4 597 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CFAP73A6NFT4 308 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SART1O43290 800 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 LMNB1P20700 586 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 STX2P32856 288 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MAGOHP61326 146 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PPP2R5AQ15172 486 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CDC37Q16543 378 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 FAM83BQ5T0W9 1011 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 C6orf118Q5T5N4 469 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 AGBL2Q5U5Z8 902 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PDXDC2PQ6P474 469 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 WDR66Q8TBY9 1149 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MAGOHBQ96A72 148 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ARL8AQ96BM9 186 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CYFIP2Q96F07 1278 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 LACRTQ9GZZ8 138 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SLITRK6Q9H5Y7 841 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms