RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MFSD14AQ96MC6 490 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 HSPA12BQ96MM6 686 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 GPR101Q96P66 508 aaPredicted RBP4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 G6PC3Q9BUM1 346 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 CDADC1Q9BWV3 514 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 EPB41L1Q9H4G0 881 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 LUC7LQ9NQ29 371 aaKnown RBP4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 PPARGC1AQ9UBK2 798 aaKnown RBP4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 TNFRSF10DQ9UBN6 386 aa4.43□□□□□ -1.7
RNU6-840P-201ENST00000517275 SLC12A8A0AV02 714 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 GOLGA6CA6NDK9 693 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 GOLGA6BA6NDN3 693 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 C1QTNF9BB2RNN3 333 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 H7C1D1 291 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 TPD52L2O43399 206 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 CLASP2O75122 1294 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 CFBP00751 764 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 AMY2AP04746 511 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 GOLGA6DP0CG33 693 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 SRGAP2CP0DJJ0 459 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 ATF3P18847 181 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 AMY2BP19961 511 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 KIR2DL1P43626 348 aaPredicted RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 KIR2DL2P43627 348 aaPredicted RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 RECQLP46063 649 aaPredicted RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 SMAD3P84022 425 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 SMAD2Q15796 467 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 DDB1Q16531 1140 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 ABCB5Q2M3G0 1257 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 MROH9Q5TGP6 573 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 HLA-DQA1Q5Y7H0 255 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 OTOP3Q7RTS5 596 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 RASSF3Q86WH2 238 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 WDR75Q8IWA0 830 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 CPA6Q8N4T0 437 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 CISD2Q8N5K1 135 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 NAT16Q8N8M0 369 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 ZNF610Q8N9Z0 462 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 UHMK1Q8TAS1 419 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 LINC01599Q8WXQ3 324 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 FUBP3Q96I24 572 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 MAP6Q96JE9 813 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 DCAF5Q96JK2 942 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 AIFM3Q96NN9 605 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 MTA3Q9BTC8 594 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 ARNT2Q9HBZ2 717 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 AASDHPPTQ9NRN7 309 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 GOLGA6AQ9NYA3 693 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 USP36Q9P275 1121 aaKnown RBP4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 ZNF180Q9UJW8 692 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 SRPK3Q9UPE1 567 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 B3GALT1Q9Y5Z6 326 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 WASHC2AQ641Q2 1341 aa4.42□□□□□ -1.7
RNU6-840P-201ENST00000517275 A0A1W2PQ45 241 aaPredicted RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 A0A1W2PQY0 241 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SSU72P8A0A1W2PR75 194 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 FADS2P1A8MWK0 482 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 PLIN1O60240 522 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 IGLV1-40P01703 118 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 MYL1P05976 194 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 PDE6AP16499 860 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 ZSCAN20P17040 1043 aaPredicted RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 VCAM1P19320 739 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SDHAP31040 664 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 BCL6P41182 706 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 IARSP41252 1262 aaKnown RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 GATA4P43694 442 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SLC6A11P48066 632 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 FNTBP49356 437 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 DNM2P50570 870 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 EPHA5P54756 1037 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 RHBDL3P58872 404 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 IRF9Q00978 393 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SPIRE1Q08AE8 756 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 LAPTM5Q13571 262 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 MLC1Q15049 377 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 GFOD2Q3B7J2 385 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 CDKAL1Q5VV42 579 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 CC2D1AQ6P1N0 951 aaPredicted RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 ZZZ3Q8IYH5 903 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SAMD3Q8N6K7 520 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 FAM181AQ8N9Y4 354 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 SHKBP1Q8TBC3 707 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 JPH3Q8WXH2 748 aaPredicted RBP4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 ASB11Q8WXH4 323 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 DLG3Q92796 817 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 UBE2FQ969M7 185 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 TP53INP1Q96A56 240 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 MISP3Q96FF7 219 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 TMEM169Q96HH4 297 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 OSBPL1AQ9BXW6 950 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 CLDND1Q9NY35 253 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 GIT1Q9Y2X7 761 aa4.41□□□□□ -1.7
RNU6-840P-201ENST00000517275 TCRBV5S4A2TA0A5A2 114 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 WASH4PA8MWX3 477 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 MAN2B1O00754 1011 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ERC2O15083 957 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms