RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 MPP2Q14168 576 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 NOL9Q5SY16 702 aaKnown RBP1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 STRIP1Q5VSL9 837 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 MRGPREQ86SM8 312 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 VRK3Q8IV63 474 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 FIBCD1Q8N539 461 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 TOE1Q96GM8 510 aaKnown RBP1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 FRMD6Q96NE9 622 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 MCMBPQ9BTE3 642 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 PTPN22Q9Y2R2 807 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 PCDHB14Q9Y5E9 798 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 FHOD1Q9Y613 1164 aa1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 COL3A1P02461 1466 aaPredicted RBP1.87□□□□□ -2.11
SCARNA23-201ENST00000516060 KRTAP23-1A1A580 65 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 F6X3S4 739 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 AURKAO14965 403 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 CDC14BO60729 498 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 CLK3P49761 638 aaKnown RBP1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 PCOLCEQ15113 449 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 RNF151Q2KHN1 245 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 ANKRD39Q53RE8 183 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 MEI1Q5TIA1 1274 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 TEPPQ6URK8 271 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 OLFML1Q6UWY5 402 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 TXNDC2Q86VQ3 553 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 CCDC144CPQ8IYA2 1237 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 DPF3Q92784 378 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 CCDC97Q96F63 343 aaPredicted RBP1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 RHOVQ96L33 236 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 DPYSL5Q9BPU6 564 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 YIPF4Q9BSR8 244 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 NOC4LQ9BVI4 516 aaKnown RBP1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 PLA2G12BQ9BX93 195 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 KATNBL1Q9H079 304 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 R3HDMLQ9H3Y0 253 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 PRDM13Q9H4Q3 707 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 GP6Q9HCN6 339 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 RNF7Q9UBF6 113 aa1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 SUCOQ9UBS9 1254 aaKnown RBP1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 SF3B6Q9Y3B4 125 aaKnown RBP1.86□□□□□ -2.11
SCARNA23-201ENST00000516060 MATN2O00339 956 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 TNFRSF10CO14798 259 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 KIAA0355O15063 1070 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 NPHS1O60500 1241 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 RPS6KA4O75676 772 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 KNG1P01042 644 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 LRG1P02750 347 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 ZNF888P0CJ79 500 aaPredicted RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 NME1P15531 152 aaKnown RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 MSX2P35548 267 aaPredicted RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 ATP2B2Q01814 1243 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 USP10Q14694 798 aaKnown RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 DCAF15Q66K64 600 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 B4GALNT3Q6L9W6 998 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 TMC5Q6UXY8 1006 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 RD3Q7Z3Z2 195 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 SLITRK4Q8IW52 837 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 REXO1L1PQ8IX06 675 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 SMG7Q92540 1137 aaKnown RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 ZDHHC15Q96MV8 337 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 SLC9A7Q96T83 725 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 NOL6Q9H6R4 1146 aaKnown RBP1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 NRDE2Q9H7Z3 1164 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 BRMS1Q9HCU9 246 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 DTLQ9NZJ0 730 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 SERPINA10Q9UK55 444 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 GIT1Q9Y2X7 761 aa1.85□□□□□ -2.11
SCARNA23-201ENST00000516060 NPHP3-ACAD11A0A0J9YXS1 232 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 MYADML2A6NDP7 307 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 CHGBP05060 677 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 KRT10P13645 584 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 PAMP19021 973 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 CD247P20963 164 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 MAPK1P28482 360 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 GNA15P30679 374 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 RPS19P39019 145 aaKnown RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 RRP1BQ14684 758 aaKnown RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 NOLC1Q14978 699 aaKnown RBP eCLIP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 SMAD2Q15796 467 aaKnown RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 TPRNQ4KMQ1 711 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 PRR16Q569H4 304 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 AXDND1Q5T1B0 1012 aaPredicted RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 PHF19Q5T6S3 580 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 ERICH6Q7L0X2 663 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 HDGFL2Q7Z4V5 671 aaPredicted RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 THEMISQ8N1K5 641 aaPredicted RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 ARRDC4Q8NCT1 418 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 EHMT1Q9H9B1 1298 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 MARCH2Q9P0N8 246 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 RBPJLQ9UBG7 517 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 TESQ9UGI8 421 aaKnown RBP1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 FRMD4BQ9Y2L6 1034 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 AK5Q9Y6K8 562 aa1.84□□□□□ -2.11
SCARNA23-201ENST00000516060 SETD1BQ9UPS6 1966 aaKnown RBP1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 GRID2IPA4D2P6 1211 aa1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 SOWAHDA6NJG2 315 aa1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 C22orf46C9J442 243 aa1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 STXBP3O00186 592 aa1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 SUPT5HO00267 1087 aaKnown RBP1.83□□□□□ -2.12
SCARNA23-201ENST00000516060 TLR3O15455 904 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms