RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 SPATC1Q76KD6 591 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 CEP68Q76N32 757 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 CPA5Q8WXQ8 436 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 SEC14L1Q92503 715 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 CCDC113Q9H0I3 377 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 AP5M1Q9H0R1 490 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 PPP1R1BQ9UD71 204 aaPredicted RBP4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 PCDHA2Q9Y5H9 948 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 RUSC2Q8N2Y8 1516 aa4.85□□□□□ -1.63
RNU4-29P-201ENST00000515943 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 H7BY64 318 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 SGSM2O43147 1006 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 PRODHO43272 600 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 ADCY3O60266 1144 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 PLA2G1BP04054 148 aaKnown RBP4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 PABPC1P11940 636 aaKnown RBP4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 CAP1Q01518 475 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 LSAMPQ13449 338 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 RASA3Q14644 834 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 SF3A1Q15459 793 aaKnown RBP4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 NTRK3Q16288 839 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 YOD1Q5VVQ6 348 aaPredicted RBP4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 B3GNT8Q7Z7M8 397 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 TRMT2BQ96GJ1 504 aaKnown RBP4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 PWWP2AQ96N64 755 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 SPATA9Q9BWV2 254 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 GPR27Q9NS67 375 aa4.84□□□□□ -1.63
RNU4-29P-201ENST00000515943 CCDC85CA6NKD9 419 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 MSCO60682 206 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 TRIM13O60858 407 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 HTRA3P83110 453 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 FOXO4P98177 505 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 MTERF2Q49AM1 385 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 VWA3BQ502W6 1294 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 RSPO2Q6UXX9 243 aaPredicted RBP4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 NSMFQ6X4W1 530 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 USP53Q70EK8 1073 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 MIB1Q86YT6 1006 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 PHF20Q9BVI0 1012 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 CDIP1Q9H305 208 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 CLDND1Q9NY35 253 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 PALD1Q9ULE6 856 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 FAN1Q9Y2M0 1017 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 COA3Q9Y2R0 106 aaPredicted RBP4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 PMF1-BGLAPU3KQ54 211 aa4.83□□□□□ -1.64
RNU4-29P-201ENST00000515943 DIAPH1O60610 1272 aaKnown RBP4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 C8BP07358 591 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 CACNB2Q08289 660 aaPredicted RBP4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 EMC4Q5J8M3 183 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 LRP10Q7Z4F1 713 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 NLGN1Q8N2Q7 840 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 FNIP1Q8TF40 1166 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 DCAF4Q8WV16 495 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 CHAMP1Q96JM3 812 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 SNTG2Q9NY99 539 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 PFDN2Q9UHV9 154 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 KDM6BO15054 1643 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 KIAA0586Q9BVV6 1533 aa4.82□□□□□ -1.64
RNU4-29P-201ENST00000515943 PPRC1Q5VV67 1664 aaKnown RBP4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 BLACEA4D250 179 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 FAM221BA6H8Z2 402 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 FFAR3O14843 346 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 DLX2Q07687 328 aaPredicted RBP4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 CHRNA2Q15822 529 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 STYK1Q6J9G0 422 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 KCNT2Q6UVM3 1135 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 ETV3LQ6ZN32 361 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 TTLL10Q6ZVT0 673 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 FAM126BQ8IXS8 530 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 LINC01356Q8N9X3 169 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 TP53I13Q8NBR0 393 aaPredicted RBP4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 SREK1Q8WXA9 508 aaKnown RBP4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 KCNC2Q96PR1 638 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 ZFYVE21Q9BQ24 234 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 EPB41L1Q9H4G0 881 aa4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 PPARGC1AQ9UBK2 798 aaKnown RBP4.81□□□□□ -1.64
RNU4-29P-201ENST00000515943 HGSO14964 777 aaPredicted RBP4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 TADA3O75528 432 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 INHBBP09529 407 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 CYP2C8P10632 490 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 BMP7P18075 431 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 GPR85P60893 370 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 VMACQ2NL98 169 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 FOXB2Q5VYV0 432 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 STEAP3Q658P3 488 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 LBX2Q6XYB7 198 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 MILR1Q7Z6M3 343 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 SAPCD2Q86UD0 394 aa4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 MARCH10Q8NA82 808 aaPredicted RBP4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 ZBTB38Q8NAP3 1195 aaPredicted RBP4.8□□□□□ -1.64
RNU4-29P-201ENST00000515943 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms