RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ZNF280CQ8ND82 737 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 HPS3Q969F9 1004 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 UTRNP46939 3433 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 E9PMD0 336 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 UBXN2AP68543 259 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 IRF2BP1Q8IU81 584 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 KLRG1Q96E93 195 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 STK24Q9Y6E0 443 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 NFIBO00712 420 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 CATSPER3Q86XQ3 398 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 CPXCR1Q8N123 301 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 P2RX5Q93086 422 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 DNAJC19Q96DA6 116 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
THUMPD3-210ENST00000515662 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 SPATA31C1P0DKV0 1188 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 CCNE1P24864 410 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 RPA1P27694 616 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 PBX1P40424 430 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 GHRHRQ02643 423 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 EHHADHQ08426 723 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 MCF2L2Q86YR7 1114 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 DUSP9Q99956 384 aaKnown RBP17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 THAP9Q9H5L6 903 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 POTEFA5A3E0 1075 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 IDEP14735 1019 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 CEP55Q53EZ4 464 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 POTEEQ6S8J3 1075 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
THUMPD3-210ENST00000515662 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 ALAS1P13196 640 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 PSMD2Q13200 908 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 ANKRD40Q6AI12 368 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 SLC5A5Q92911 643 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 PDCL3Q9H2J4 239 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 RPTORQ8N122 1335 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 ZBED4O75132 1171 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 HOXA7P31268 230 aaPredicted RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 COPB1P53618 953 aaKnown RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 NOL9Q5SY16 702 aaKnown RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 C12orf42Q96LP6 360 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 RABGAP1Q9Y3P9 1069 aa17.23■□□□□ 0.35
THUMPD3-210ENST00000515662 PHIPQ8WWQ0 1821 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 EML1O00423 815 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 MEIS1O00470 390 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 VWA5AO00534 786 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 NRDCO43847 1150 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 PSMD10O75832 226 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 FDX1P10109 184 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 EEF1GP26641 437 aaKnown RBP17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 MUM1L1Q5H9M0 696 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 GPBP1Q86WP2 473 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 VPS16Q9H269 839 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 KCND1Q9NSA2 647 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 C19orf81C9J6K1 198 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 N4BP3O15049 544 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 CYP11B2P19099 503 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 HMGCS2P54868 508 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 CENPPQ6IPU0 288 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 GUF1Q8N442 669 aaKnown RBP17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 CSGALNACT2Q8N6G5 542 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 ATG4CQ96DT6 458 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 POLR3CQ9BUI4 534 aaPredicted RBP17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 ADARB2Q9NS39 739 aaKnown RBP17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 HOMER2Q9NSB8 354 aa17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
THUMPD3-210ENST00000515662 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 KCNJ6P48051 423 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 PSMC6P62333 389 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 COASYQ13057 564 aa17.21■□□□□ 0.35
THUMPD3-210ENST00000515662 PPP2R5CQ13362 524 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms