RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 MTMR7Q9Y216 660 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 TCF20Q9UGU0 1960 aaKnown RBP10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 SCN10AQ9Y5Y9 1956 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZNF536O15090 1300 aa10.51□□□□□ -0.73
CDC42SE2-212ENST00000515533 REV3LO60673 3130 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 RANBP6O60518 1105 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 PLA2G6O60733 806 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CABYRO75952 493 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CSF2RAP15509 400 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 GRIN2CQ14957 1233 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 FSCN1Q16658 493 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CCDC96Q2M329 555 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 RCSD1Q6JBY9 416 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CXCL17Q6UXB2 119 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 NSMFQ6X4W1 530 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 FOXJ1Q92949 421 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 GAS2L1Q99501 681 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 MTIF3Q9H2K0 278 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 PRR12Q9ULL5 1215 aa10.5□□□□□ -0.73
CDC42SE2-212ENST00000515533 TRANK1O15050 2925 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 NMT2O60551 498 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 PPFIA3O75145 1194 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 ACRP10323 421 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 NKX3-2P78367 333 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 KCNMA1Q12791 1236 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 ZNF365Q70YC5 407 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 EEPD1Q7L9B9 569 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 FBXO16Q8IX29 292 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 OTUD7AQ8TE49 926 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 SEZ6LQ9BYH1 1024 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 PBX4Q9BYU1 374 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 HIPK3Q9H422 1215 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 CYP39A1Q9NYL5 469 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
CDC42SE2-212ENST00000515533 GRXCR1A8MXD5 290 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 CTAGE5O15320 804 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 DYNC1LI2O43237 492 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 CD4P01730 458 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 NR3C2P08235 984 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 CYP2C18P33260 490 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 GSK3AP49840 483 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 SNAP25P60880 206 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 IQSEC1Q6DN90 963 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 DCAF4Q8WV16 495 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 VTA1Q9NP79 307 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 IL23AQ9NPF7 189 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 IL17RBQ9NRM6 502 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 ADD3Q9UEY8 706 aaKnown RBP10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 MSRAQ9UJ68 235 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 Q9Y3F1 56 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 ASTN1O14525 1302 aa10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 PRRC2BQ5JSZ5 2229 aaKnown RBP10.48□□□□□ -0.73
CDC42SE2-212ENST00000515533 FOXP2O15409 715 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 FGBP02675 491 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 ICAM1P05362 532 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 NR5A1Q13285 461 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 RAB30Q15771 203 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 RRP12Q5JTH9 1297 aaKnown RBP10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 KIAA1211Q6ZU35 1233 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 RASGRP2Q7LDG7 609 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 SLC43A3Q8NBI5 491 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 PPM1EQ8WY54 764 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 EVI5LQ96CN4 794 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 MPHOSPH6Q99547 160 aaKnown RBP10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 RANBP17Q9H2T7 1088 aaKnown RBP10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 PDGFCQ9NRA1 345 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 ANAPC4Q9UJX5 808 aa10.47□□□□□ -0.73
CDC42SE2-212ENST00000515533 XIRP2A4UGR9 3374 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 KAT6AQ92794 2004 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 ORC4O43929 436 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 B4GALT4O60513 344 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 TOP1P11387 765 aaKnown RBP10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 SLC16A2P36021 539 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 CPT1AP50416 773 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 CCL23P55773 120 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 SYDE2Q5VT97 1194 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 TAPT1Q6NXT6 567 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 OTOP2Q7RTS6 562 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 RPUSD2Q8IZ73 545 aaKnown RBP10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 USP38Q8NB14 1042 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms