RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
CSF1R-208ENST00000515239 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 PPP4R3BQ5MIZ7 849 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 MSLNLQ96KJ4 702 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 IGFLR1Q9H665 355 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 MTMR7Q9Y216 660 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 COL4A6Q14031 1691 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
CSF1R-208ENST00000515239 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 H0Y858 1186 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 M0R2C6 588 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 RNF113AO15541 343 aaKnown RBP13.93□□□□□ -0.18
CSF1R-208ENST00000515239 RB1P06400 928 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 BMPR1AP36894 532 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 PPARAQ07869 468 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 ASCL5Q7RTU5 278 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 ERMP1Q7Z2K6 904 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 ASIC4Q96FT7 647 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 TLR9Q9NR96 1032 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSF1R-208ENST00000515239 NLRC5Q86WI3 1866 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 MYO15AQ9UKN7 3530 aa13.93□□□□□ -0.18
CSF1R-208ENST00000515239 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 B4DLN1 442 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 F2P00734 622 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 THPOP40225 353 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
CSF1R-208ENST00000515239 SIGLEC14Q08ET2 396 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 CAMK1Q14012 370 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 KATNAL1Q9BW62 490 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 CLEC1BQ9P126 229 aa13.92□□□□□ -0.18
CSF1R-208ENST00000515239 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
CSF1R-208ENST00000515239 FAM186AA6NE01 2351 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 SLC3A2P08195 630 aaKnown RBP13.91□□□□□ -0.18
CSF1R-208ENST00000515239 ZNF286BP0CG31 522 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 CTNNB1P35222 781 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 FIBCD1Q8N539 461 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 SEPT8Q92599 483 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
CSF1R-208ENST00000515239 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 TAAR1Q96RJ0 339 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 FSD1Q9BTV5 496 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 C11orf84Q9BUA3 381 aaPredicted RBP13.91□□□□□ -0.18
CSF1R-208ENST00000515239 IFIH1Q9BYX4 1025 aaKnown RBP13.91□□□□□ -0.18
CSF1R-208ENST00000515239 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
CSF1R-208ENST00000515239 TSPY2A6NKD2 308 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 HMMRO75330 724 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 HOXD8P13378 290 aaPredicted RBP13.9□□□□□ -0.18
CSF1R-208ENST00000515239 RRP1P56182 461 aaKnown RBP13.9□□□□□ -0.18
CSF1R-208ENST00000515239 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 SMRP1Q8NCR6 262 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
CSF1R-208ENST00000515239 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
CSF1R-208ENST00000515239 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
CSF1R-208ENST00000515239 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
CSF1R-208ENST00000515239 COASYQ13057 564 aa13.89□□□□□ -0.19
CSF1R-208ENST00000515239 STXBP2Q15833 593 aa13.89□□□□□ -0.19
CSF1R-208ENST00000515239 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
CSF1R-208ENST00000515239 CLP1Q92989 425 aaKnown RBP13.89□□□□□ -0.19
CSF1R-208ENST00000515239 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
CSF1R-208ENST00000515239 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
CSF1R-208ENST00000515239 PRR23AA6NEV1 266 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 MMP1P03956 469 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 ZFYP08048 801 aaPredicted RBP13.88□□□□□ -0.19
CSF1R-208ENST00000515239 NBL1P41271 181 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 NDUFV1P49821 464 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 NUBP1P53384 320 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
CSF1R-208ENST00000515239 NSUN6Q8TEA1 469 aaKnown RBP13.88□□□□□ -0.19
CSF1R-208ENST00000515239 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 NAPBQ9H115 298 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 PLAGL2Q9UPG8 496 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 RWDD3Q9Y3V2 267 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
CSF1R-208ENST00000515239 FOXP2O15409 715 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 SMARCA5O60264 1052 aaPredicted RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 CSPG5O95196 566 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms