RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 TCF15Q12870 199 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 IKBKEQ14164 716 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
TRIM6-211ENST00000515022 BRDTQ58F21 947 aaPredicted RBP9.93□□□□□ -0.82
TRIM6-211ENST00000515022 RPAINQ86UA6 219 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 MYOCDQ8IZQ8 938 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 CCDC155Q8N6L0 562 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 NEDD1Q8NHV4 660 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 KAT2BQ92831 832 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 OSBP2Q969R2 916 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 PABPC5Q96DU9 382 aaKnown RBP9.93□□□□□ -0.82
TRIM6-211ENST00000515022 KIF1BPQ96EK5 621 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 ALG1Q9BT22 464 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 ADD3Q9UEY8 706 aaKnown RBP9.93□□□□□ -0.82
TRIM6-211ENST00000515022 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
TRIM6-211ENST00000515022 KMT2EQ8IZD2 1858 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 RAD50Q92878 1312 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 WDR87Q6ZQQ6 2873 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 TMEM221A6NGB7 291 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 M0R296 226 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 M0R2C6 588 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 SMARCA5O60264 1052 aaPredicted RBP9.92□□□□□ -0.82
TRIM6-211ENST00000515022 KPNA6O60684 536 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 HMMRO75330 724 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 UPP2O95045 317 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIM6-211ENST00000515022 PTPN5P54829 565 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 NBR1Q14596 966 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 PTPROQ16827 1216 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 CCDC96Q2M329 555 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 TIGD5Q53EQ6 642 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 HSP90AB4PQ58FF6 505 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 ZNF618Q5T7W0 954 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 RCSD1Q6JBY9 416 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 TRAF7Q6Q0C0 670 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 IGFLR1Q9H665 355 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 HDAC6Q9UBN7 1215 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 PRKAG3Q9UGI9 489 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 INSL6Q9Y581 213 aa9.92□□□□□ -0.82
TRIM6-211ENST00000515022 LINC01565O15544 149 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 GPAA1O43292 621 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 SORBS3O60504 671 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 ICAM1P05362 532 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 ZNF286BP0CG31 522 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 HIC1Q14526 733 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 LY6KQ17RY6 165 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 TRIM71Q2Q1W2 868 aaKnown RBP9.91□□□□□ -0.82
TRIM6-211ENST00000515022 HERC4Q5GLZ8 1057 aaPredicted RBP9.91□□□□□ -0.82
TRIM6-211ENST00000515022 TSHZ3Q63HK5 1081 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 SIRT2Q8IXJ6 389 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 TMEM192Q8IY95 271 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 DBF4BQ8NFT6 615 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 SCFD2Q8WU76 684 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 CLEC4DQ8WXI8 215 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 OSBPL7Q9BZF2 842 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 UPF3BQ9BZI7 483 aaKnown RBP9.91□□□□□ -0.82
TRIM6-211ENST00000515022 NSUN3Q9H649 340 aaKnown RBP9.91□□□□□ -0.82
TRIM6-211ENST00000515022 GPCPD1Q9NPB8 672 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 FAM50BQ9Y247 325 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 VPS13AQ96RL7 3174 aa9.91□□□□□ -0.82
TRIM6-211ENST00000515022 CACNA1BQ00975 2339 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 PLXNA3P51805 1871 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 DCHS1Q96JQ0 3298 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 H3BNC9 293 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 STXBP3O00186 592 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 NKRFO15226 690 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 MBTPS2O43462 519 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 LGR5O75473 907 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 AMHP03971 560 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 NEFLP07196 543 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 MMP3P08254 477 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 PSEN2P49810 448 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 VCPP55072 806 aaKnown RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 RPS6P62753 249 aaKnown RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 ARHGAP1Q07960 439 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 HYAL1Q12794 435 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 SMAD2Q15796 467 aaKnown RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 SYDE2Q5VT97 1194 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 GIMAP6Q6P9H5 292 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 RNF207Q6ZRF8 634 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 SEPT14Q6ZU15 432 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 EDAQ92838 391 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 YME1L1Q96TA2 773 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
TRIM6-211ENST00000515022 IL17RBQ9NRM6 502 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 CTNNA3Q9UI47 895 aa9.9□□□□□ -0.82
TRIM6-211ENST00000515022 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.83
TRIM6-211ENST00000515022 PLIN4Q96Q06 1357 aa9.89□□□□□ -0.83
TRIM6-211ENST00000515022 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
TRIM6-211ENST00000515022 GRM6O15303 877 aa9.89□□□□□ -0.83
TRIM6-211ENST00000515022 PLA2G6O60733 806 aa9.89□□□□□ -0.83
TRIM6-211ENST00000515022 TBX10O75333 385 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms