RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ZNF76P36508 570 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 KRT85P78386 507 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 ATP2C1P98194 919 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 SLC39A14Q15043 492 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 PTPAQ15257 358 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 CCL14Q16627 93 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 FAM173BQ6P4H8 233 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 ETNPPLQ8TBG4 499 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 TRIB2Q92519 343 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 USP28Q96RU2 1077 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.24
PDLIM5-220ENST00000514830 DOCK5Q9H7D0 1870 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SLC37A4O43826 429 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 ADCY3O60266 1144 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 HMGCRP04035 888 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 DNM1Q05193 864 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 MTMR1Q13613 665 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 PRR16Q569H4 304 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 CCDC62Q6P9F0 684 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 PLA2G4DQ86XP0 818 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 LINC00301Q8NCQ3 95 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 GIMAP8Q8ND71 665 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 CYP2W1Q8TAV3 490 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 RAET1EQ8TD07 263 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 SLC5A5Q92911 643 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 RIT2Q99578 217 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 NFASCO94856 1347 aa13.57□□□□□ -0.24
PDLIM5-220ENST00000514830 TNRC18O15417 2968 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 FRMPD3Q5JV73 1810 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 MSH4O15457 936 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 PPP6R2O75170 966 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 BAG4O95429 457 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 CYBAP13498 195 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 MCM7P33993 719 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 PTGDRQ13258 359 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 ACVR2BQ13705 512 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 ZNF174Q15697 407 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 IQSEC1Q6DN90 963 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 HAS1Q92839 578 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 AGO4Q9HCK5 861 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 TBC1D22BQ9NU19 505 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 ELP1O95163 1332 aa13.56□□□□□ -0.24
PDLIM5-220ENST00000514830 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 DHX15O43143 795 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 PSMD10O75832 226 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 ARP10275 920 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 KCNA2P16389 499 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 GRK4P32298 578 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 NBR1Q14596 966 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 TTLL4Q14679 1199 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 CALCRLQ16602 461 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 B3GNT9Q6UX72 402 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 FERMT2Q96AC1 680 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 Q9Y3F1 56 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 HTTP42858 3142 aa13.55□□□□□ -0.24
PDLIM5-220ENST00000514830 SPTLC2O15270 562 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 CYP2C19P33261 490 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 NEDD9Q14511 834 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 PDIA5Q14554 519 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 DUSP28Q4G0W2 176 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 FBXO16Q8IX29 292 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 TMEM87AQ8NBN3 555 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 EMID1Q96A84 441 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 DDX49Q9Y6V7 483 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-220ENST00000514830 LOXHD1Q8IVV2 1947 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms