RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 RPUSD2Q8IZ73 545 aaKnown RBP3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 REXO1Q8N1G1 1221 aaKnown RBP3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 KLHL36Q8N4N3 616 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 CLIP3Q96DZ5 547 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 FERD3LQ96RJ6 166 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 GINM1Q9NU53 330 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 GFOD1Q9NXC2 390 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 NUDT5Q9UKK9 219 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 FBXL21Q9UKT6 434 aa3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.36□□□□□ -1.87
SMARCAD1-208ENST00000514232 C9IYK1 514 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 NUDT3O95989 172 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 LMNAP02545 664 aaKnown RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 TP53P04637 393 aaPredicted RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 GSTM1P09488 218 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 IL13P35225 146 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 RANGAP1P46060 587 aaPredicted RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 ZYXQ15942 572 aaKnown RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 TDRD10Q5VZ19 366 aaKnown RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 ETV3LQ6ZN32 361 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 ZNF654Q8IZM8 581 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 GPR150Q8NGU9 434 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 SLC6A18Q96N87 628 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 PDGFDQ9GZP0 370 aaPredicted RBP3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 ACBD3Q9H3P7 528 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 EFR3BQ9Y2G0 817 aa3.35□□□□□ -1.87
SMARCAD1-208ENST00000514232 CLEC3AO75596 197 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 ACO1P21399 889 aaKnown RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 VAMP1P23763 118 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 ACRV1P26436 265 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 GJA4P35212 333 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 MLLT6P55198 1093 aaPredicted RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 LRRFIP1Q32MZ4 808 aaKnown RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 ZCCHC14Q8WYQ9 949 aaKnown RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 BRF1Q92994 677 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 MKRN2Q9H000 416 aaKnown RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 ZNF703Q9H7S9 590 aaPredicted RBP3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 L2HGDHQ9H9P8 463 aa3.34□□□□□ -1.87
SMARCAD1-208ENST00000514232 TNFRSF10CO14798 259 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 L1CAMP32004 1257 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 NASPP49321 788 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 RBM25P49756 843 aaKnown RBP3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 NFATC3Q12968 1075 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 PPP2R5EQ16537 467 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 DCAF15Q66K64 600 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 MAMDC4Q6UXC1 1216 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 CD300LDQ6UXZ3 194 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 UNC5AQ6ZN44 842 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 CABP7Q86V35 215 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 CCDC144CPQ8IYA2 1237 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 FUKQ8N0W3 1084 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 CRBNQ96SW2 442 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 PRR13Q9NZ81 148 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 ADAM29Q9UKF5 820 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 ZNRF3Q9ULT6 936 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 PCDHB10Q9UN67 800 aa3.33□□□□□ -1.88
SMARCAD1-208ENST00000514232 MEIS3P2A8K0S8 358 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 GSNP06396 782 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 RAD51AP2Q09MP3 1159 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 AUHQ13825 339 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 INTS3Q68E01 1043 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 LAIR1Q6GTX8 287 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 PPFIBP1Q86W92 1011 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 CPLX3Q8WVH0 158 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 GPRASP2Q96D09 838 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 LMF1Q96S06 567 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 MTA3Q9BTC8 594 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 SLC4A7Q9Y6M7 1214 aa3.32□□□□□ -1.88
SMARCAD1-208ENST00000514232 TMEM191CA6NGB0 347 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 IKBKBO14920 756 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 PPP1R11O60927 126 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 EIF6P56537 245 aaKnown RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 FSTL1Q12841 308 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 AXDND1Q5T1B0 1012 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 C7orf61Q8IZ16 206 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 GIMAP8Q8ND71 665 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 FGD4Q96M96 766 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 PTCHD1Q96NR3 888 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 CEP72Q9P209 647 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 SUCOQ9UBS9 1254 aaKnown RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 TMEFF2Q9UIK5 374 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 INPP5FQ9Y2H2 1132 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 SIT1Q9Y3P8 196 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 ZNF451Q9Y4E5 1061 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 PCDHB12Q9Y5F1 795 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 MRVI1Q9Y6F6 885 aa3.31□□□□□ -1.88
SMARCAD1-208ENST00000514232 A0A1W2PQH9 124 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 VAMP4O75379 141 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 RAD17O75943 681 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 IMPDH2P12268 514 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 GUCY2CP25092 1073 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 ERCC5P28715 1186 aaPredicted RBP3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 CD38P28907 300 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 CCNFP41002 786 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 PMS1P54277 932 aaKnown RBP3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 PPP2R5DQ14738 602 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 GNPTABQ3T906 1256 aa3.3□□□□□ -1.88
SMARCAD1-208ENST00000514232 NOL9Q5SY16 702 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms