RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SLC28A3Q9HAS3 691 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 TAF6LQ9Y6J9 622 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 CHD9Q3L8U1 2897 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 SPATA31C2B4DYI2 1134 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 KIF28PB7ZC32 967 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
HTT-212ENST00000513639 MAFGO15525 162 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 RGS20O76081 388 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 GGPS1O95749 300 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 FOSL2P15408 326 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 PSEN2P49810 448 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 DHX32Q7L7V1 743 aaKnown RBP8.41□□□□□ -1.06
HTT-212ENST00000513639 NLRX1Q86UT6 975 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 SGMS1Q86VZ5 419 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 AFAP1L1Q8TED9 768 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 PIBF1Q8WXW3 757 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 KAT2BQ92831 832 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 SCLYQ96I15 445 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 CDHR1Q96JP9 859 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 NEK1Q96PY6 1258 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 GAS2L1Q99501 681 aaPredicted RBP8.41□□□□□ -1.06
HTT-212ENST00000513639 SENP7Q9BQF6 1050 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 PBX4Q9BYU1 374 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 WNT8AQ9H1J5 351 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 UNC80Q8N2C7 3258 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
HTT-212ENST00000513639 UMODL1Q5DID0 1318 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 NOP56O00567 594 aaKnown RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 FIBPO43427 364 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 EFCAB14O75071 495 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 CDC45O75419 566 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 BAIAP3O94812 1187 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 GNAT1P11488 350 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 SELPP16109 830 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 ATP2A2P16615 1042 aaKnown RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 ICAM3P32942 547 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 FGD1P98174 961 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 SP2Q02086 613 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 PTK7Q13308 1070 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 MFSD10Q14728 455 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 KIAA0753Q2KHM9 967 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 SLC35G1Q2M3R5 365 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 METTL7BQ6UX53 244 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 DEFB128Q7Z7B8 93 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.4□□□□□ -1.06
HTT-212ENST00000513639 SRBD1Q8N5C6 995 aaKnown RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 MAFAQ8NHW3 353 aaPredicted RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 MYLIPQ8WY64 445 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 CCDC136Q96JN2 1154 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 INPP4AQ96PE3 977 aaPredicted RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 GLT8D2Q9H1C3 349 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 RBM28Q9NW13 759 aaKnown RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 CXXC1Q9P0U4 656 aaPredicted RBP8.4□□□□□ -1.06
HTT-212ENST00000513639 HDAC6Q9UBN7 1215 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 GTF2IRD1Q9UHL9 959 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 PCDHA11Q9Y5I1 949 aa8.4□□□□□ -1.06
HTT-212ENST00000513639 MYO9BQ13459 2157 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 PRUNE2Q8WUY3 3088 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 CCDC196A0A1B0GTZ2 297 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 SPDYE3A6NKU9 549 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 GRXCR1A8MXD5 290 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 H3BRB1 525 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 HAS3O00219 553 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 MEIS2O14770 477 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 F2P00734 622 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 FOSP01100 380 aaPredicted RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 MRPS9P82933 396 aaKnown RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 HSDL1Q3SXM5 330 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 USP17L6PQ6QN14 398 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 BBXQ8WY36 941 aaPredicted RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 ALG1Q9BT22 464 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 MYL10Q9BUA6 226 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
HTT-212ENST00000513639 BAZ2BQ9UIF8 2168 aaKnown RBP8.39□□□□□ -1.07
HTT-212ENST00000513639 EMSYQ7Z589 1322 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 ABHD14A-ACY1A0A1B0GW23 586 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 hCG_1984214I3L0E3 225 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 ZBTB43O43298 467 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 CKBP12277 381 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 UBA1P22314 1058 aaKnown RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 PBX2P40425 430 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 KCNJ6P48051 423 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 RCAN1P53805 252 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 RBL2Q08999 1139 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 IKBKEQ14164 716 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 TMTC3Q6ZXV5 915 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms