RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 AP3B2Q13367 1082 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 EDRF1Q3B7T1 1238 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 TMEM119Q4V9L6 283 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 MIIPQ5JXC2 388 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 ANKRD40Q6AI12 368 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 C3orf67Q6ZVT6 689 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 CCDC65Q8IXS2 484 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 ZC3H3Q8IXZ2 948 aaKnown RBP8.96□□□□□ -0.98
DDR1-273ENST00000513514 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 STAG2Q8N3U4 1231 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 CNBD1Q8NA66 436 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 LRRN4CLQ8ND94 238 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 ACRBPQ8NEB7 543 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 SH3RF3Q8TEJ3 882 aaPredicted RBP8.96□□□□□ -0.98
DDR1-273ENST00000513514 COG1Q8WTW3 980 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 TGFBRAP1Q8WUH2 860 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 RAD54LQ92698 747 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 RPGRQ92834 1020 aaKnown RBP8.96□□□□□ -0.98
DDR1-273ENST00000513514 VTI1AQ96AJ9 217 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 COA1Q9GZY4 146 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 EHD4Q9H223 541 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 TMEM60Q9H2L4 133 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 CD209Q9NNX6 404 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 MTMR4Q9NYA4 1195 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 CEP72Q9P209 647 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 FBXL5Q9UKA1 691 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 ZHX1Q9UKY1 873 aaPredicted RBP8.96□□□□□ -0.98
DDR1-273ENST00000513514 GUCA1BQ9UMX6 200 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 SNX12Q9UMY4 172 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 GDAQ9Y2T3 454 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 SLX4Q8IY92 1834 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 NAV1Q8NEY1 1877 aa8.96□□□□□ -0.98
DDR1-273ENST00000513514 DDX60LQ5H9U9 1706 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 IGKV6D-41A0A0C4DH26 115 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 TULP2O00295 520 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 NMT2O60551 498 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 BTDP43251 543 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 RGS19P49795 217 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 GABPAQ06546 454 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 LETM2Q2VYF4 491 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 SLC9C1Q4G0N8 1177 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 HAUS3Q68CZ6 603 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 PRR5LQ6MZQ0 368 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 SPATS2Q86XZ4 545 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 MYOCDQ8IZQ8 938 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 TBCKQ8TEA7 893 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 CUL5Q93034 780 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 MTMR8Q96EF0 704 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 NOX5Q96PH1 765 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 CHP1Q99653 195 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 CRACR2AQ9BSW2 395 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 IFIH1Q9BYX4 1025 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 DHX36Q9H2U1 1008 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 DEF6Q9H4E7 631 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 SH2D4AQ9H788 454 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 ABCB6Q9NP58 842 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 ABT1Q9ULW3 272 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 SIK3Q9Y2K2 1263 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 REXO2Q9Y3B8 237 aaKnown RBP8.95□□□□□ -0.98
DDR1-273ENST00000513514 HYOU1Q9Y4L1 999 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 LTBP3Q9NS15 1303 aa8.95□□□□□ -0.98
DDR1-273ENST00000513514 hCG_1642624A0A1W2PR95 340 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 IQCA1LA6NCM1 817 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 B4DLN1 442 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 GOLGA8KD6RF30 607 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 PES1O00541 588 aaKnown RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 SERPING1P05155 500 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 HLA-DOAP06340 250 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 CYP2D6P10635 497 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 EPB41P11171 864 aaKnown RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 PDHBP11177 359 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 EPHB4P54760 987 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 RHBDL3P58872 404 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 HERVK_113P62684 666 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 VSNL1P62760 191 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 HDLBPQ00341 1268 aaKnown RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 STK4Q13043 487 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 PPFIA1Q13136 1202 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 PPP2R5EQ16537 467 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 NFIL3Q16649 462 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 ZSCAN26Q16670 478 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 DEFB115Q30KQ5 88 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 CFAP221Q4G0U5 840 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 CYP4F22Q6NT55 531 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 HHIPL2Q6UWX4 724 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 CCNI2Q6ZMN8 369 aaPredicted RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 SP8Q8IXZ3 490 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 ERMNQ8TAM6 284 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 DCAF4Q8WV16 495 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 GPKOWQ92917 476 aaPredicted RBP eCLIP8.94□□□□□ -0.98
DDR1-273ENST00000513514 MKL1Q969V6 931 aa8.94□□□□□ -0.98
DDR1-273ENST00000513514 PCMTD1Q96MG8 357 aaPredicted RBP8.94□□□□□ -0.98
DDR1-273ENST00000513514 FAM20AQ96MK3 541 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms