RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MSLNLQ96KJ4 702 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 DDX41Q9UJV9 622 aaKnown RBP13.21□□□□□ -0.29
RNF4-218ENST00000513284 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
RNF4-218ENST00000513284 DMDP11532 3685 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 RSPH10B2B2RC85 870 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 LOC730098B7Z3J9 87 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 C5orf67F2Z3F1 127 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 NCK2O43639 380 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 F2P00734 622 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 RSPH10BP0C881 870 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 ADAM15Q13444 863 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 SMAD4Q13485 552 aaKnown RBP13.2□□□□□ -0.3
RNF4-218ENST00000513284 MFSD10Q14728 455 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 DGKDQ16760 1214 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 FBXL6Q8N531 539 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 YME1L1Q96TA2 773 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
RNF4-218ENST00000513284 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 KMT2EQ8IZD2 1858 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
RNF4-218ENST00000513284 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
RNF4-218ENST00000513284 TSPY2A6NKD2 308 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 THPOP40225 353 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 EMID1Q96A84 441 aaPredicted RBP13.19□□□□□ -0.3
RNF4-218ENST00000513284 PRRX2Q99811 253 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 IGFLR1Q9H665 355 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
RNF4-218ENST00000513284 HMMRO75330 724 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 EYA4O95677 639 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 FGRP09769 529 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 HOXD8P13378 290 aaPredicted RBP13.18□□□□□ -0.3
RNF4-218ENST00000513284 AVPR2P30518 371 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 BMPR1AP36894 532 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
RNF4-218ENST00000513284 PKN1Q16512 942 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 ASCL5Q7RTU5 278 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
RNF4-218ENST00000513284 ASIC4Q96FT7 647 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 NAPBQ9H115 298 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
RNF4-218ENST00000513284 EMSYQ7Z589 1322 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 RB1P06400 928 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
RNF4-218ENST00000513284 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
RNF4-218ENST00000513284 PDHBP11177 359 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 DNAJB1P25685 340 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 HOXC8P31273 242 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
RNF4-218ENST00000513284 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
RNF4-218ENST00000513284 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
RNF4-218ENST00000513284 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 H0Y858 1186 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 TREHO43280 583 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
RNF4-218ENST00000513284 PPFIA4O75335 1185 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 RGS20O76081 388 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
RNF4-218ENST00000513284 SP2Q02086 613 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 LAMC2Q13753 1193 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
RNF4-218ENST00000513284 PPTC7Q8NI37 304 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 SEPT8Q92599 483 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 ATOH1Q92858 354 aaPredicted RBP13.16□□□□□ -0.3
RNF4-218ENST00000513284 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
RNF4-218ENST00000513284 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 WDR87Q6ZQQ6 2873 aa13.16□□□□□ -0.3
RNF4-218ENST00000513284 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 RALGAPA2Q2PPJ7 1873 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 B4DLN1 442 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
RNF4-218ENST00000513284 CTNNB1P35222 781 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
RNF4-218ENST00000513284 ZNF543Q08ER8 600 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 STXBP2Q15833 593 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 USH1GQ495M9 461 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms