RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 HABP4Q5JVS0 413 aaKnown RBP6.79□□□□□ -1.32
CHD1-210ENST00000513064 CYP4F22Q6NT55 531 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 NOP9Q86U38 636 aaKnown RBP6.79□□□□□ -1.32
CHD1-210ENST00000513064 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 MIB1Q86YT6 1006 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 SLC7A14Q8TBB6 771 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 PCDHA8Q9Y5H6 950 aa6.79□□□□□ -1.32
CHD1-210ENST00000513064 KRIT1O00522 736 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 PLD2O14939 933 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 MAFKO60675 156 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 CRTAMO95727 393 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHD1-210ENST00000513064 SPIRE1Q08AE8 756 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 SSPNQ14714 243 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 OTOP3Q7RTS5 596 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 B3GNT8Q7Z7M8 397 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 MTDHQ86UE4 582 aaKnown RBP6.78□□□□□ -1.32
CHD1-210ENST00000513064 PIP4K2CQ8TBX8 421 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 KCNJ15Q99712 375 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 SMOC1Q9H4F8 434 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
CHD1-210ENST00000513064 NDOR1Q9UHB4 597 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
CHD1-210ENST00000513064 PCDHA9Q9Y5H5 950 aa6.78□□□□□ -1.32
CHD1-210ENST00000513064 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 TCRBV5S2A0A599 114 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 CACNB2Q08289 660 aaPredicted RBP6.77□□□□□ -1.33
CHD1-210ENST00000513064 ETV3LQ6ZN32 361 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 FAM129CQ86XR2 697 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 TMEFF1Q8IYR6 380 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 PHOSPHO1Q8TCT1 267 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 SCLYQ96I15 445 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 MAGEB10Q96LZ2 347 aaPredicted RBP6.77□□□□□ -1.33
CHD1-210ENST00000513064 PDGFDQ9GZP0 370 aaPredicted RBP6.77□□□□□ -1.33
CHD1-210ENST00000513064 TRIM39Q9HCM9 518 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 SFMBT1Q9UHJ3 866 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 KCTD3Q9Y597 815 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 PCDHB4Q9Y5E5 795 aa6.77□□□□□ -1.33
CHD1-210ENST00000513064 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 GNAT1P11488 350 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 COL6A2P12110 1019 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 MC3RP41968 323 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 FNDC3BQ53EP0 1204 aaKnown RBP6.76□□□□□ -1.33
CHD1-210ENST00000513064 ZNF385BQ569K4 471 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 FAM126BQ8IXS8 530 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 SYNPOQ8N3V7 929 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 TOX2Q96NM4 488 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 MYOTQ9UBF9 498 aa6.76□□□□□ -1.33
CHD1-210ENST00000513064 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
CHD1-210ENST00000513064 NKRFO15226 690 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD1-210ENST00000513064 RAPGEF3O95398 923 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 PI3P19957 117 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 FOXO4P98177 505 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 C16orf59Q7L2K0 433 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 BRAPQ7Z569 592 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 C1QL4Q86Z23 238 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 TRIM48Q8IWZ4 208 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 ARRDC4Q8NCT1 418 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 UHMK1Q8TAS1 419 aaKnown RBP6.75□□□□□ -1.33
CHD1-210ENST00000513064 PANK1Q8TE04 598 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 FBXW5Q969U6 566 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 DACT3Q96B18 629 aaPredicted RBP6.75□□□□□ -1.33
CHD1-210ENST00000513064 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 ASH2LQ9UBL3 628 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 FAN1Q9Y2M0 1017 aa6.75□□□□□ -1.33
CHD1-210ENST00000513064 MRPL42Q9Y6G3 142 aaKnown RBP6.75□□□□□ -1.33
CHD1-210ENST00000513064 TCRBV16S1A1N1A0A5B0 115 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 RFXAPO00287 272 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 GSTA4O15217 222 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 RFPL3O75679 317 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 RASGRP1O95267 797 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 CFPP27918 469 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 LIMS1P48059 325 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 CNKSR3Q6P9H4 555 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 FGD2Q7Z6J4 655 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 HOMER1Q86YM7 354 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 ZC3H7AQ8IWR0 971 aaKnown RBP6.74□□□□□ -1.33
CHD1-210ENST00000513064 LRRC56Q8IYG6 542 aaPredicted RBP6.74□□□□□ -1.33
CHD1-210ENST00000513064 NGRNQ9NPE2 291 aaKnown RBP6.74□□□□□ -1.33
CHD1-210ENST00000513064 NUB1Q9Y5A7 615 aa6.74□□□□□ -1.33
CHD1-210ENST00000513064 ASMTLO95671 621 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 CKMP06732 381 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 C8BP07358 591 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 CIAPIN1Q6FI81 312 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 C16orf86Q6ZW13 317 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
CHD1-210ENST00000513064 NLGN1Q8N2Q7 840 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 TTLL11Q8NHH1 800 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 APPBP2Q92624 585 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 PWWP2AQ96N64 755 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 FANCLQ9NW38 375 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 HSPBP1Q9NZL4 362 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 DSEQ9UL01 958 aa6.73□□□□□ -1.33
CHD1-210ENST00000513064 TBX22Q9Y458 520 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms