RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 GRIN2DO15399 1336 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 CNTNAP5Q8WYK1 1306 aa7.48□□□□□ -1.21
KDM3B-208ENST00000512928 UNC80Q8N2C7 3258 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 PPFIA3O75145 1194 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 CD4P01730 458 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 SUPT20HL2P0C7V6 817 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 ACRP10323 421 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 UBA1P22314 1058 aaKnown RBP7.47□□□□□ -1.21
KDM3B-208ENST00000512928 CDC27P30260 824 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 EPHB4P54760 987 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 AKAP17AQ02040 695 aaKnown RBP7.47□□□□□ -1.21
KDM3B-208ENST00000512928 GHRHRQ02643 423 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 PPIGQ13427 754 aaKnown RBP eCLIP7.47□□□□□ -1.213e-6■□□□□ 10.9
KDM3B-208ENST00000512928 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 WWC2Q6AWC2 1192 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 NLRX1Q86UT6 975 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
KDM3B-208ENST00000512928 C7orf31Q8N865 590 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 PPTC7Q8NI37 304 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 TTYH1Q9H313 450 aaPredicted RBP7.47□□□□□ -1.21
KDM3B-208ENST00000512928 EHMT1Q9H9B1 1298 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 PRDM6Q9NQX0 595 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 UMODL1Q5DID0 1318 aa7.47□□□□□ -1.21
KDM3B-208ENST00000512928 BAZ2BQ9UIF8 2168 aaKnown RBP7.46□□□□□ -1.21
KDM3B-208ENST00000512928 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PIK3CDO00329 1044 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 MEIS2O14770 477 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 FIBPO43427 364 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 STAM2O75886 525 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 RGS20O76081 388 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 ADD1P35611 737 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PSEN2P49810 448 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 ADCY7P51828 1080 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 CCT2P78371 535 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 SP2Q02086 613 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 MFSD10Q14728 455 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PTGISQ16647 500 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 KIAA0753Q2KHM9 967 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 HSDL1Q3SXM5 330 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 CELF3Q5SZQ8 465 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 UTP14CQ5TAP6 766 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 MYSM1Q5VVJ2 828 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PSRC1Q6PGN9 363 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 RUFY3Q7L099 469 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 CYFIP1Q7L576 1253 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 OTOP2Q7RTS6 562 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 DEFB128Q7Z7B8 93 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 USP38Q8NB14 1042 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 SLC43A3Q8NBI5 491 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PHKBQ93100 1093 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 EMID1Q96A84 441 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 SCLYQ96I15 445 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 PGBD1Q96JS3 809 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.221e-8■□□□□ 8.3
KDM3B-208ENST00000512928 LARP6Q9BRS8 491 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 NOC4LQ9BVI4 516 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 KATNAL1Q9BW62 490 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 UPF3BQ9BZI7 483 aaKnown RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 DAXXQ9UER7 740 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-208ENST00000512928 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 GBF1Q92538 1859 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 KIAA1217Q5T5P2 1943 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
KDM3B-208ENST00000512928 SMCO2A6NFE2 343 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 CPLX1O14810 134 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 TGFB3P10600 412 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF76P36508 570 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 STK3Q13188 491 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 MTMR1Q13613 665 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 NEDD9Q14511 834 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF697Q5TEC3 545 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 FAM109BQ6ICB4 259 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 GDF6Q6KF10 455 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 XRRA1Q6P2D8 792 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF365Q70YC5 407 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 CCDC155Q8N6L0 562 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 INPP4AQ96PE3 977 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 SLC26A6Q9BXS9 759 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 FTOQ9C0B1 505 aaKnown RBP eCLIP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 WNT8AQ9H1J5 351 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 BCAS3Q9H6U6 928 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 NCOA5Q9HCD5 579 aaKnown RBP7.45□□□□□ -1.22
KDM3B-208ENST00000512928 IL23AQ9NPF7 189 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 TMEM260Q9NX78 707 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 BARHL2Q9NY43 387 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 PCDHA6Q9UN73 950 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 PCDHA8Q9Y5H6 950 aa7.45□□□□□ -1.22
KDM3B-208ENST00000512928 LAMA2P24043 3122 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms