RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LRG1P02750 347 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 RPL13P26373 211 aaKnown RBP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 SLC6A11P48066 632 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 MLLT6P55198 1093 aaPredicted RBP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 ADAM9Q13443 819 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 RGL3Q3MIN7 710 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 ACBD5Q5T8D3 534 aaPredicted RBP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 YOD1Q5VVQ6 348 aaPredicted RBP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 KCNT2Q6UVM3 1135 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 TTLL7Q6ZT98 887 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 EEPD1Q7L9B9 569 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 CLEC4DQ8WXI8 215 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 RBM15Q96T37 977 aaKnown RBP eCLIP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 IER2Q9BTL4 223 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 CLDND1Q9NY35 253 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 NTMQ9P121 344 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 BLACEA4D250 179 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 SMARCA5O60264 1052 aaPredicted RBP3.78□□□□□ -1.8
PDGFC-208ENST00000512711 ADRB1P08588 477 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 COL6A2P12110 1019 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 RBM25P49756 843 aaKnown RBP3.78□□□□□ -1.8
PDGFC-208ENST00000512711 EFEMP1Q12805 493 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 KCNAB2Q13303 367 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 GNL2Q13823 731 aaKnown RBP3.78□□□□□ -1.8
PDGFC-208ENST00000512711 NTRK3Q16288 839 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 PHF19Q5T6S3 580 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 STEAP3Q658P3 488 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 HHIPL2Q6UWX4 724 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 FAM126BQ8IXS8 530 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 TXNDC5Q8NBS9 432 aaKnown RBP3.78□□□□□ -1.8
PDGFC-208ENST00000512711 OSBP2Q969R2 916 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 GMLQ99445 158 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 IGSF5Q9NSI5 407 aa3.78□□□□□ -1.8
PDGFC-208ENST00000512711 H7BY64 318 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 SLC27A2O14975 620 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 PRODHO43272 600 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 MYO1BO43795 1136 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 IL13P35225 146 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 GTF2A2P52657 109 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 GJA9P57773 515 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 GRIN1Q05586 938 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 DDR2Q16832 855 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 ZXDCQ2QGD7 858 aaPredicted RBP3.77□□□□□ -1.81
PDGFC-208ENST00000512711 TBC1D10BQ4KMP7 808 aaPredicted RBP3.77□□□□□ -1.81
PDGFC-208ENST00000512711 TEPPQ6URK8 271 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 USP53Q70EK8 1073 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 SLC43A3Q8NBI5 491 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 PIP4K2CQ8TBX8 421 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 ZSWIM3Q96MP5 696 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 ARHGEF4Q9NR80 690 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 INVSQ9Y283 1065 aa3.77□□□□□ -1.81
PDGFC-208ENST00000512711 COA3Q9Y2R0 106 aaPredicted RBP3.77□□□□□ -1.81
PDGFC-208ENST00000512711 NKRFO15226 690 aaKnown RBP eCLIP3.76□□□□□ -1.81
PDGFC-208ENST00000512711 LTFP02788 710 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 ITGB3P05106 788 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 INSRRP14616 1297 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 NKX3-2P78367 333 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 MAP4K2Q12851 820 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 EMC4Q5J8M3 183 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 TMC5Q6UXY8 1006 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 ZC3H18Q86VM9 953 aaKnown RBP3.76□□□□□ -1.81
PDGFC-208ENST00000512711 PROSER1Q86XN7 944 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 TTLL6Q8N841 843 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 KCTD13Q8WZ19 329 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 TOE1Q96GM8 510 aaKnown RBP3.76□□□□□ -1.81
PDGFC-208ENST00000512711 KCNJ15Q99712 375 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 PHF20Q9BVI0 1012 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 SSBP3Q9BWW4 388 aaPredicted RBP3.76□□□□□ -1.81
PDGFC-208ENST00000512711 GPR27Q9NS67 375 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 ZNF652Q9Y2D9 606 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 CCDC9Q9Y3X0 531 aaKnown RBP3.76□□□□□ -1.81
PDGFC-208ENST00000512711 TELO2Q9Y4R8 837 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 PCDHB4Q9Y5E5 795 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 ASXL2Q76L83 1435 aa3.76□□□□□ -1.81
PDGFC-208ENST00000512711 MROH6A6NGR9 719 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 K7ESM1 405 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 B4GALT3O60512 393 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 DGKIO75912 1065 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 PABPC1P11940 636 aaKnown RBP3.75□□□□□ -1.81
PDGFC-208ENST00000512711 HSP90AA2PQ14568 343 aaPredicted RBP3.75□□□□□ -1.81
PDGFC-208ENST00000512711 SPATC1Q76KD6 591 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 MBD6Q96DN6 1003 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 PTPN18Q99952 460 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 YIPF4Q9BSR8 244 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 EPN3Q9H201 632 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 SMOC1Q9H4F8 434 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 SLC6A20Q9NP91 592 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 DTLQ9NZJ0 730 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 MYOTQ9UBF9 498 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 ASH2LQ9UBL3 628 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 CROTQ9UKG9 612 aa3.75□□□□□ -1.81
PDGFC-208ENST00000512711 R3HCC1Q9Y3T6 440 aaKnown RBP3.75□□□□□ -1.81
PDGFC-208ENST00000512711 AGRPO00253 132 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 ZNF28P17035 718 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 KIAA2012Q0VF49 1180 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 RAB33AQ14088 237 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 PRAMEF18Q5VWM3 479 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 FOXB2Q5VYV0 432 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 NSMFQ6X4W1 530 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms