RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
NEK1-208ENST00000512193 MROH7-TTC4A0A0A0MT08 1334 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L15C9J2P7 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L11C9JVI0 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L18D6R9N7 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L22D6RA61 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L19D6RCP7 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L20D6RJB6 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 BBOX1O75936 387 aa8.79□□□□□ -1
NEK1-208ENST00000512193 HOXA13P31271 388 aaPredicted RBP8.79□□□□□ -1
NEK1-208ENST00000512193 PSMC2P35998 433 aaKnown RBP8.79□□□□□ -1
NEK1-208ENST00000512193 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -1
NEK1-208ENST00000512193 ATP2C1P98194 919 aaPredicted RBP8.79□□□□□ -1
NEK1-208ENST00000512193 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L24Q0WX57 530 aa8.79□□□□□ -1
NEK1-208ENST00000512193 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
NEK1-208ENST00000512193 MTA3Q9BTC8 594 aa8.79□□□□□ -1
NEK1-208ENST00000512193 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
NEK1-208ENST00000512193 MRFAP1Q9Y605 127 aa8.79□□□□□ -1
NEK1-208ENST00000512193 SERPING1P05155 500 aa8.79□□□□□ -1
NEK1-208ENST00000512193 ATF7P17544 494 aaPredicted RBP8.79□□□□□ -1
NEK1-208ENST00000512193 ATP11AP98196 1134 aa8.79□□□□□ -1
NEK1-208ENST00000512193 MYL7Q01449 175 aa8.79□□□□□ -1
NEK1-208ENST00000512193 APBA1Q02410 837 aa8.79□□□□□ -1
NEK1-208ENST00000512193 UNC13DQ70J99 1090 aa8.79□□□□□ -1
NEK1-208ENST00000512193 HPS3Q969F9 1004 aa8.79□□□□□ -1
NEK1-208ENST00000512193 CEP95Q96GE4 821 aa8.79□□□□□ -1
NEK1-208ENST00000512193 FUCA2Q9BTY2 467 aa8.79□□□□□ -1
NEK1-208ENST00000512193 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
NEK1-208ENST00000512193 A0A1B0GUA9 196 aa8.79□□□□□ -1
NEK1-208ENST00000512193 LRRC53A6NM62 1247 aa8.79□□□□□ -1
NEK1-208ENST00000512193 FAM196BA6NMK8 535 aa8.79□□□□□ -1
NEK1-208ENST00000512193 NOP56O00567 594 aaKnown RBP8.79□□□□□ -1
NEK1-208ENST00000512193 APBA3O96018 575 aa8.79□□□□□ -1
NEK1-208ENST00000512193 LMNB1P20700 586 aa8.79□□□□□ -1
NEK1-208ENST00000512193 PCK1P35558 622 aa8.79□□□□□ -1
NEK1-208ENST00000512193 RCAN1P53805 252 aa8.79□□□□□ -1
NEK1-208ENST00000512193 CLUL1Q15846 466 aa8.79□□□□□ -1
NEK1-208ENST00000512193 ZNF354CQ86Y25 554 aa8.79□□□□□ -1
NEK1-208ENST00000512193 SREK1Q8WXA9 508 aaKnown RBP8.79□□□□□ -1
NEK1-208ENST00000512193 KCNB2Q92953 911 aa8.79□□□□□ -1
NEK1-208ENST00000512193 ARHGEF2Q92974 986 aaKnown RBP8.79□□□□□ -1
NEK1-208ENST00000512193 CEP63Q96MT8 703 aa8.79□□□□□ -1
NEK1-208ENST00000512193 EPB41L4AQ9HCS5 686 aaPredicted RBP8.79□□□□□ -1
NEK1-208ENST00000512193 UTYO14607 1347 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CAMSAP1Q5T5Y3 1602 aa8.78□□□□□ -1
NEK1-208ENST00000512193 ESYT3A0FGR9 886 aa8.78□□□□□ -1
NEK1-208ENST00000512193 FCER1AP12319 257 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PDE6BP35913 854 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CLNS1AP54105 237 aaKnown RBP8.78□□□□□ -1
NEK1-208ENST00000512193 ADCY1Q08828 1119 aa8.78□□□□□ -1
NEK1-208ENST00000512193 GRAPQ13588 217 aa8.78□□□□□ -1
NEK1-208ENST00000512193 DEPTORQ8TB45 409 aa8.78□□□□□ -1
NEK1-208ENST00000512193 GRAPLQ8TC17 118 aaPredicted RBP8.78□□□□□ -1
NEK1-208ENST00000512193 C1orf112Q9NSG2 853 aa8.78□□□□□ -1
NEK1-208ENST00000512193 TMOD4Q9NZQ9 345 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CCPG1Q9ULG6 757 aa8.78□□□□□ -1
NEK1-208ENST00000512193 REREQ9P2R6 1566 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PNMA6FA0A0J9YX94 578 aa8.78□□□□□ -1
NEK1-208ENST00000512193 E9PMD0 336 aa8.78□□□□□ -1
NEK1-208ENST00000512193 THAP12O43422 761 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CLTAP09496 248 aa8.78□□□□□ -1
NEK1-208ENST00000512193 BMP3P12645 472 aa8.78□□□□□ -1
NEK1-208ENST00000512193 SLCO1A2P46721 670 aa8.78□□□□□ -1
NEK1-208ENST00000512193 LIG4P49917 911 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PSMD2Q13200 908 aa8.78□□□□□ -1
NEK1-208ENST00000512193 FYB2Q5VWT5 728 aa8.78□□□□□ -1
NEK1-208ENST00000512193 OTUD6AQ7L8S5 288 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CTAGE3PQ8IX95 158 aa8.78□□□□□ -1
NEK1-208ENST00000512193 TC2NQ8N9U0 490 aa8.78□□□□□ -1
NEK1-208ENST00000512193 POMGNT1Q8WZA1 660 aa8.78□□□□□ -1
NEK1-208ENST00000512193 ZNF577Q9BSK1 485 aa8.78□□□□□ -1
NEK1-208ENST00000512193 ANO3Q9BYT9 981 aa8.78□□□□□ -1
NEK1-208ENST00000512193 SH3GLB2Q9NR46 395 aa8.78□□□□□ -1
NEK1-208ENST00000512193 RNF14Q9UBS8 474 aa8.78□□□□□ -1
NEK1-208ENST00000512193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
NEK1-208ENST00000512193 DLC1Q96QB1 1528 aa8.78□□□□□ -1
NEK1-208ENST00000512193 NRXN1Q9ULB1 1477 aa8.78□□□□□ -1
NEK1-208ENST00000512193 MYO1FO00160 1098 aa8.78□□□□□ -1
NEK1-208ENST00000512193 KCNQ2O43526 872 aa8.78□□□□□ -1
NEK1-208ENST00000512193 NCK2O43639 380 aa8.78□□□□□ -1
NEK1-208ENST00000512193 CSF1RP07333 972 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PDE6CP51160 858 aa8.78□□□□□ -1
NEK1-208ENST00000512193 VSNL1P62760 191 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PDCLQ13371 301 aa8.78□□□□□ -1
NEK1-208ENST00000512193 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
NEK1-208ENST00000512193 NFRKBQ6P4R8 1299 aa8.78□□□□□ -1
NEK1-208ENST00000512193 RAD9BQ6WBX8 426 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PIGOQ8TEQ8 1089 aa8.78□□□□□ -1
NEK1-208ENST00000512193 MAIP1Q8WWC4 291 aa8.78□□□□□ -1
NEK1-208ENST00000512193 ANKRD7Q92527 254 aa8.78□□□□□ -1
NEK1-208ENST00000512193 PPP1R12CQ9BZL4 782 aa8.78□□□□□ -1
NEK1-208ENST00000512193 INTS9Q9NV88 658 aaKnown RBP8.78□□□□□ -1
NEK1-208ENST00000512193 A0A1B0GTH6 734 aa8.77□□□□□ -1
NEK1-208ENST00000512193 PPEF1O14829 653 aaPredicted RBP8.77□□□□□ -1
NEK1-208ENST00000512193 N4BP1O75113 896 aaKnown RBP8.77□□□□□ -1
NEK1-208ENST00000512193 PALMO75781 387 aa8.77□□□□□ -1
NEK1-208ENST00000512193 GFPT1Q06210 699 aaPredicted RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms