RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
PDGFRA-209ENST00000512143 MAFGO15525 162 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 DHX15O43143 795 aaKnown RBP11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 COBLO75128 1261 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF202O95125 648 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 CCND2P30279 289 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 MAPK4P31152 587 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 SYKP43405 635 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 SEMA3FQ13275 785 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 CRHR2Q13324 411 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 GRB14Q14449 540 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF792Q3KQV3 632 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 RBM43Q6ZSC3 357 aaKnown RBP11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 GPR142Q7Z601 462 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 GPRASP2Q96D09 838 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 RIT2Q99578 217 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 CLSTN2Q9H4D0 955 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 AGO4Q9HCK5 861 aaKnown RBP11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 KCNH7Q9NS40 1196 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 PLXNB2O15031 1838 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.61
PDGFRA-209ENST00000512143 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 SLC26A4O43511 780 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 PGK2P07205 417 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 MYCLP12524 364 aaPredicted RBP11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 ADORA2AP29274 412 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 CDC25AP30304 524 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 ICAM3P32942 547 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 MAP2K2P36507 400 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 PPP2R5CQ13362 524 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 MTMR1Q13613 665 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 STXBP2Q15833 593 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 E2F4Q16254 413 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 LONRF3Q496Y0 759 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 MORN1Q5T089 497 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 CCDC183Q5T5S1 534 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 LRWD1Q9UFC0 647 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
PDGFRA-209ENST00000512143 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 POTEMA6NI47 508 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 SLC15A5A6NIM6 579 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 IPO5O00410 1097 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 POLR2DO15514 142 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 ATP9AO75110 1047 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 UBA7P41226 1012 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 VEGFBP49765 207 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 ITGB3BPQ13352 177 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 TMEM266Q2M3C6 531 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 ZSCAN23Q3MJ62 389 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 HYIQ5T013 277 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 USP6NLQ92738 828 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 SYAP1Q96A49 352 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 UIMC1Q96RL1 719 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF577Q9BSK1 485 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 PLXNA1Q9UIW2 1896 aa11.25□□□□□ -0.61
PDGFRA-209ENST00000512143 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 B4DLN1 442 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 EML1O00423 815 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 CTAGE5O15320 804 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 MARCH6O60337 910 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 IGHA2P01877 340 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 HOXC6P09630 235 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 KCNA2P16389 499 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 CTGFP29279 349 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 ZNF445P59923 1031 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 GRM1Q13255 1194 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 LRCH2Q5VUJ6 765 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 NLRX1Q86UT6 975 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 CABP7Q86V35 215 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 IQUBQ8NA54 791 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 CDHR1Q96JP9 859 aa11.24□□□□□ -0.61
PDGFRA-209ENST00000512143 PNMA5Q96PV4 448 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms