RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RRAGAQ7L523 313 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 TPH2Q8IWU9 490 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 ANKRD42Q8N9B4 389 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 CTTNBP2NLQ9P2B4 639 aa11.83□□□□□ -0.52
CPNE4-209ENST00000512055 FOXN1O15353 648 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 CASP7P55210 303 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 ICE2Q659A1 982 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 SHC4Q6S5L8 630 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 PPP1R13BQ96KQ4 1090 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 H7C1D1 291 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 TTLL1O95922 423 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 EPB41P11171 864 aaKnown RBP11.82□□□□□ -0.52
CPNE4-209ENST00000512055 CCT5P48643 541 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 NEK2P51955 445 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 PRKG1Q13976 671 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 NUP58Q9BVL2 599 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 BACH1O14867 736 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 GCNT3O95395 438 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 RASA3Q14644 834 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC144BQ3MJ40 725 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 MRPL44Q9H9J2 332 aaKnown RBP11.82□□□□□ -0.52
CPNE4-209ENST00000512055 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 STK36Q9NRP7 1315 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 RFX1P22670 979 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 ATP1A2P50993 1020 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 CYP4A11Q02928 519 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 MYCT1Q8N699 235 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 KCNB2Q92953 911 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 LZTS1Q9Y250 596 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
CPNE4-209ENST00000512055 HNRNPCL2B2RXH8 293 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 HNRNPCL1O60812 293 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 MMP10P09238 476 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 COPB1P53618 953 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 KRT71Q3SY84 523 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 TMEM47Q9BQJ4 181 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ABCB5Q2M3G0 1257 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 HAUS8Q9BT25 410 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 DDX28Q9NUL7 540 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 TSC22D4Q9Y3Q8 395 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 AFF2P51816 1311 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ARHGEF35A5YM69 484 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 MAGEA1P43355 309 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 UBE2SQ16763 222 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 C16orf87Q6PH81 154 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 PIP4K2CQ8TBX8 421 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 NT5C3AQ9H0P0 336 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 FAM205CA6NFA0 338 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 MRPS15P82914 257 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 IFT20Q8IY31 132 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 MYOCDQ8IZQ8 938 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ENOX1Q8TC92 643 aaKnown RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
CPNE4-209ENST00000512055 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 KRT15P19012 456 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 STX2P32856 288 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 RBL2Q08999 1139 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 ASPRV1Q53RT3 343 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 KSR1Q8IVT5 923 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
CPNE4-209ENST00000512055 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 MAFGO15525 162 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 EFCAB13Q8IY85 973 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 FLAD1Q8NFF5 587 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC169A6NNP5 214 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 B4DLN1 442 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 GPSM2P81274 684 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 IL1RL1Q01638 556 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 LRRC41Q15345 812 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 CCDC84Q86UT8 332 aaPredicted RBP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 STX10O60499 249 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 DNM2P50570 870 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 PPP2R5CQ13362 524 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
CPNE4-209ENST00000512055 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
CPNE4-209ENST00000512055 ZNF512BQ96KM6 892 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms