RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 EP400NLQ6ZTU2 488 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 PNMA2Q9UL42 364 aa22.31■■□□□ 1.16
HMGCS1-206ENST00000511774 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 B4DLN1 442 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 RGS20O76081 388 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 AMHP03971 560 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 MRPL12P52815 198 aaKnown RBP22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 DLX2Q07687 328 aaPredicted RBP22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 STXBP2Q15833 593 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 SERINC5Q86VE9 423 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 ADHFE1Q8IWW8 467 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 PPTC7Q8NI37 304 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 NSUN6Q8TEA1 469 aaKnown RBP22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 SNX27Q96L92 541 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 RMDN3Q96TC7 470 aa22.3■■□□□ 1.16
HMGCS1-206ENST00000511774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 EIF2AK2P19525 551 aaKnown RBP22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 HAND2P61296 217 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 CDC37Q16543 378 aaPredicted RBP22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 PTPROQ16827 1216 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 TMEM192Q8IY95 271 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 KCNH6Q9H252 994 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 PRKAG3Q9UGI9 489 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 CTNNA3Q9UI47 895 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 SALL3Q9BXA9 1300 aa22.29■■□□□ 1.16
HMGCS1-206ENST00000511774 CACNA1HO95180 2353 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 RSPH10B2B2RC85 870 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 RSPH10BP0C881 870 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 THPOP40225 353 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 CLUL1Q15846 466 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 HSDL1Q3SXM5 330 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 RPAINQ86UA6 219 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 FBXO11Q86XK2 927 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 TBC1D10CQ8IV04 446 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 TOP1MTQ969P6 601 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 FAM227BQ96M60 508 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 IWS1Q96ST2 819 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 KATNAL1Q9BW62 490 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 NSUN3Q9H649 340 aaKnown RBP22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 CLDND1Q9NY35 253 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 MUTYHQ9UIF7 546 aa22.28■■□□□ 1.16
HMGCS1-206ENST00000511774 OPLAHO14841 1288 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 UPP2O95045 317 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 LINC00271P0C7V0 271 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 CTC1Q2NKJ3 1217 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 SAMD11Q96NU1 681 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 YME1L1Q96TA2 773 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 ZKSCAN3Q9BRR0 538 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 ABCB11O95342 1321 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 EMSYQ7Z589 1322 aa22.27■■□□□ 1.16
HMGCS1-206ENST00000511774 A0A0D9SFI3 127 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 NR3C2P08235 984 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 SP2Q02086 613 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 LAMC2Q13753 1193 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 MYSM1Q5VVJ2 828 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 ZNF589Q86UQ0 364 aaPredicted RBP22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 DHX37Q8IY37 1157 aaKnown RBP22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 ADGRF4Q8IZF3 695 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 MIER1Q8N108 512 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 PRSS33Q8NF86 280 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 GPKOWQ92917 476 aaPredicted RBP eCLIP22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 TTC14Q96N46 770 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 C16orf70Q9BSU1 422 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 BCAS3Q9H6U6 928 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 PXMP2Q9NR77 195 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 ZFHX2Q9C0A1 2572 aaPredicted RBP22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 DOCK5Q9H7D0 1870 aa22.26■■□□□ 1.15
HMGCS1-206ENST00000511774 SPTBN4Q9H254 2564 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 EIF3JO75822 258 aaKnown RBP22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 MX1P20591 662 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 HOXC8P31273 242 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 GTF2F1P35269 517 aaKnown RBP eCLIP22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 HYAL1Q12794 435 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 SMAD2Q15796 467 aaKnown RBP22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 QRICH1Q2TAL8 776 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 ARHGEF16Q5VV41 709 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 NEDD4P46934 1319 aa22.25■■□□□ 1.15
HMGCS1-206ENST00000511774 TREHO43280 583 aa22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 CTSHP09668 335 aa22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 HSPD1P10809 573 aaKnown RBP22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 IER5LQ5T953 404 aa22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 IL31RAQ8NI17 732 aa22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 ZFP91Q96JP5 570 aaPredicted RBP22.24■■□□□ 1.15
HMGCS1-206ENST00000511774 GRM6O15303 877 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 MBTPS2O43462 519 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 TBX10O75333 385 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 PPFIA4O75335 1185 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 HERC4Q5GLZ8 1057 aaPredicted RBP22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 CELF3Q5SZQ8 465 aaKnown RBP22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 RNF135Q8IUD6 432 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 MAF1Q9H063 256 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 HELLSQ9NRZ9 838 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
HMGCS1-206ENST00000511774 LINC01565O15544 149 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 GGPS1O95749 300 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 SEPT8Q92599 483 aa22.22■■□□□ 1.15
HMGCS1-206ENST00000511774 ATP6V0A1Q93050 837 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms