RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 OR52Z1P0C646 297 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 POLR2MP0CAP2 368 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 PFKFB1P16118 471 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 CYP2B6P20813 491 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 MARCKSP29966 332 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 TXLNAP40222 546 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 CAP1Q01518 475 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 TREML2Q5T2D2 321 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 FAM109BQ6ICB4 259 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 XRRA1Q6P2D8 792 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 RASGRP4Q8TDF6 673 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 GDF15Q99988 308 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 ANO3Q9BYT9 981 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 CCPG1Q9ULG6 757 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 STXBP5LQ9Y2K9 1186 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 CTDP1Q9Y5B0 961 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-228ENST00000511676 PARP14Q460N5 1801 aa10.3□□□□□ -0.76
NR1I3-228ENST00000511676 MCM7P33993 719 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 SYKP43405 635 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 FXR2P51116 673 aaKnown RBP eCLIP10.29□□□□□ -0.76
NR1I3-228ENST00000511676 NDUFA8P51970 172 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 PDIA5Q14554 519 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 ZNF174Q15697 407 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 Q4G0T1 1027 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 MAP3K21Q5TCX8 1036 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 JAKMIP3Q5VZ66 844 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 CCDC174Q6PII3 467 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 DTHD1Q6ZMT9 781 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 NIPA1Q7RTP0 329 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 DPP9Q86TI2 863 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 CCDC84Q86UT8 332 aaPredicted RBP10.29□□□□□ -0.76
NR1I3-228ENST00000511676 SLFN12Q8IYM2 578 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 C7orf61Q8IZ16 206 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
NR1I3-228ENST00000511676 TNMDQ9H2S6 317 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 CUEDC2Q9H467 287 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 GOLPH3LQ9H4A5 285 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 FBXO40Q9UH90 709 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
NR1I3-228ENST00000511676 CEP290O15078 2479 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 KBTBD13C9JR72 458 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 ZNF202O95125 648 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 MYL1P05976 194 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 ARHGAP4P98171 946 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 USH1GQ495M9 461 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 ABRAQ8N0Z2 381 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 MROH8Q9H579 483 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-228ENST00000511676 PTPRFP10586 1907 aa10.28□□□□□ -0.76
NR1I3-228ENST00000511676 MGAMO43451 1857 aa10.27□□□□□ -0.76
NR1I3-228ENST00000511676 RLFQ13129 1914 aa10.27□□□□□ -0.76
NR1I3-228ENST00000511676 A0A1B0GVL5 298 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 DNM1LO00429 736 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 WNT7AO00755 349 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 SLC25A27O95847 323 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 HOXC6P09630 235 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 SLFN14P0C7P3 912 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 CALCRLQ16602 461 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 UBE2SQ16763 222 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 WDR78Q5VTH9 848 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 SHCBP1Q8NEM2 672 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
NR1I3-228ENST00000511676 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
NR1I3-228ENST00000511676 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-228ENST00000511676 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
NR1I3-228ENST00000511676 DDX25Q9UHL0 483 aaKnown RBP10.27□□□□□ -0.77
NR1I3-228ENST00000511676 BRCA2P51587 3418 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms