RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
CLDND1-224ENST00000511667 PSMC6P62333 389 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 KRT32Q14532 448 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 TMEM240Q5SV17 173 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 KAT2BQ92831 832 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 RRP36Q96EU6 259 aaKnown RBP15.58■□□□□ 0.08
CLDND1-224ENST00000511667 MTG1Q9BT17 334 aaPredicted RBP15.58■□□□□ 0.08
CLDND1-224ENST00000511667 LRRC2Q9BYS8 371 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
CLDND1-224ENST00000511667 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 SLC12A7Q9Y666 1083 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 NID2Q14112 1375 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 REV3LO60673 3130 aa15.58■□□□□ 0.08
CLDND1-224ENST00000511667 B4GALT4O60513 344 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 GH1P01241 217 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 MMP3P08254 477 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 TGFB3P10600 412 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 ICAM3P32942 547 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 MRPS9P82933 396 aaKnown RBP15.57■□□□□ 0.08
CLDND1-224ENST00000511667 PTPN11Q06124 597 aaPredicted RBP15.57■□□□□ 0.08
CLDND1-224ENST00000511667 LY6KQ17RY6 165 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 NFRKBQ6P4R8 1299 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 PSRC1Q6PGN9 363 aaPredicted RBP15.57■□□□□ 0.08
CLDND1-224ENST00000511667 SESTD1Q86VW0 696 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 INPP4AQ96PE3 977 aaPredicted RBP15.57■□□□□ 0.08
CLDND1-224ENST00000511667 CTAGE1Q96RT6 745 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
CLDND1-224ENST00000511667 TRPV6Q9H1D0 765 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 NKX2-4Q9H2Z4 354 aa15.57■□□□□ 0.08
CLDND1-224ENST00000511667 TLR3O15455 904 aaKnown RBP15.56■□□□□ 0.08
CLDND1-224ENST00000511667 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
CLDND1-224ENST00000511667 RXRAP19793 462 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 SEPT14Q6ZU15 432 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 AFG1LQ8WV93 481 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 COG5Q9UP83 839 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
CLDND1-224ENST00000511667 UMODL1Q5DID0 1318 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 CNTNAP5Q8WYK1 1306 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 PRR33A8MZF0 331 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 HAS3O00219 553 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 STAM2O75886 525 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 EVCP57679 992 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 SP2Q02086 613 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 SEMA3FQ13275 785 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 NBPF20Q3BBV1 942 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 BRDTQ58F21 947 aaPredicted RBP15.55■□□□□ 0.08
CLDND1-224ENST00000511667 XRRA1Q6P2D8 792 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 NFXL1Q6ZNB6 911 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
CLDND1-224ENST00000511667 PPTC7Q8NI37 304 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 VTI1AQ96AJ9 217 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 MTIF3Q9H2K0 278 aaKnown RBP15.55■□□□□ 0.08
CLDND1-224ENST00000511667 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
CLDND1-224ENST00000511667 MYH7BA7E2Y1 1941 aa15.55■□□□□ 0.08
CLDND1-224ENST00000511667 SPATA31C2B4DYI2 1134 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 PI4K2BG5E9Z4 385 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 TLL1O43897 1013 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 CCND2P30279 289 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 LAMC2Q13753 1193 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 CELF3Q5SZQ8 465 aaKnown RBP15.54■□□□□ 0.08
CLDND1-224ENST00000511667 PCNX4Q63HM2 1172 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 USP17L6PQ6QN14 398 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 KHSRPQ92945 711 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■■□□ 15
CLDND1-224ENST00000511667 TCEANC2Q96MN5 208 aa15.54■□□□□ 0.08
CLDND1-224ENST00000511667 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
CLDND1-224ENST00000511667 F2P00734 622 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 MYL3P08590 195 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 CSF2RAP15509 400 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 UBA1P22314 1058 aaKnown RBP15.53■□□□□ 0.08
CLDND1-224ENST00000511667 HOXC8P31273 242 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 CYP2C18P33260 490 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 NHLH1Q02575 133 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 RBL2Q08999 1139 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 TYW1BQ6NUM6 668 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 ZNF365Q70YC5 407 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 MICU3Q86XE3 530 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 GPKOWQ92917 476 aaPredicted RBP eCLIP15.53■□□□□ 0.08
CLDND1-224ENST00000511667 HIPK3Q9H422 1215 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 TRMT13Q9NUP7 481 aaKnown RBP15.53■□□□□ 0.08
CLDND1-224ENST00000511667 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
CLDND1-224ENST00000511667 YBX2Q9Y2T7 364 aaKnown RBP15.53■□□□□ 0.08
CLDND1-224ENST00000511667 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
CLDND1-224ENST00000511667 TRANK1O15050 2925 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 ZBTB43O43298 467 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 GTPBP6O43824 516 aaPredicted RBP15.52■□□□□ 0.08
CLDND1-224ENST00000511667 PPFIA4O75335 1185 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 REC8O95072 547 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 CDC27P30260 824 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 DGKDQ16760 1214 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 HSDL1Q3SXM5 330 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 FCHSD1Q86WN1 690 aa15.52■□□□□ 0.08
CLDND1-224ENST00000511667 RAB11FIP4Q86YS3 637 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms