RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 NEXMIFQ5QGS0 1516 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 P4HA2O15460 535 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ATP9BO43861 1147 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SPATA31D3P0C874 917 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 CXCR5P32302 372 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 CD97P48960 835 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 GSTM4Q03013 218 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 USH1GQ495M9 461 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SMUG1Q53HV7 270 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 TMEM53Q6P2H8 277 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 LRIG3Q6UXM1 1119 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SPATA31D4Q6ZUB0 917 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 LRRC43Q8N309 656 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 STAMQ92783 540 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 TRIM11Q96F44 468 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ABHD8Q96I13 439 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 NLRP3Q96P20 1036 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 AGXT2Q9BYV1 514 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 VPS16Q9H269 839 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ESF1Q9H501 851 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 UBAP1Q9NZ09 502 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 DDX25Q9UHL0 483 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 TSKSQ9UJT2 592 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 DBNLQ9UJU6 430 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 CROTQ9UKG9 612 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SNX12Q9UMY4 172 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 MYH13Q9UKX3 1938 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ANKARQ7Z5J8 1434 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 POLR2DO15514 142 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 KRT86O43790 486 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 HOXA10P31260 410 aaPredicted RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 CCNFP41002 786 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 CLCN2P51788 898 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 CACNA2D1P54289 1103 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SH3BGRP55822 239 aaPredicted RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 SLC39A6Q13433 755 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 MORC3Q14149 939 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 KRT32Q14532 448 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SLC44A4Q53GD3 710 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 EPHA10Q5JZY3 1008 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ERMARDQ5T6L9 678 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 THOC7Q6I9Y2 204 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 IFT81Q8WYA0 676 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 RSPH1Q8WYR4 309 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 GPATCH3Q96I76 525 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 IFT74Q96LB3 600 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF317Q96PQ6 595 aaPredicted RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 XPO6Q96QU8 1125 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 EYA1Q99502 592 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 SPATA16Q9BXB7 569 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 RAB17Q9H0T7 212 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 PLCB1Q9NQ66 1216 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 GDF3Q9NR23 364 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 TUBA8Q9NY65 449 aaPredicted RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 R3HDM2Q9Y2K5 976 aaKnown RBP8□□□□□ -1.13
CPNE4-208ENST00000511604 COMMD3-BMI1R4GMX3 469 aa8□□□□□ -1.13
CPNE4-208ENST00000511604 A0A0J9YVX5 310 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 HTR3EA5X5Y0 456 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 NDUFB5O43674 189 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 CTNND1O60716 968 aaKnown RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ZPR1O75312 459 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 GLI1P08151 1106 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 TPBGLP0DKB5 382 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 MYL6BP14649 208 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 KCNA3P22001 575 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 COPS2P61201 443 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 PLS1Q14651 629 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 DDB1Q16531 1140 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 TBC1D9BQ66K14 1250 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF662Q6ZS27 426 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 PALB2Q86YC2 1186 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 RNF10Q8N5U6 811 aaKnown RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ATP8B4Q8TF62 1192 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 STK32AQ8WU08 396 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 PHKBQ93100 1093 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 LTV1Q96GA3 475 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 CTAGE1Q96RT6 745 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 NUP88Q99567 741 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 FAM129AQ9BZQ8 928 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ETNK2Q9NVF9 386 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 C9orf78Q9NZ63 289 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SAMD15Q9P1V8 674 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 CTTNBP2NLQ9P2B4 639 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 INTUQ9ULD6 942 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 LRCH1Q9Y2L9 728 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 DAAM1Q9Y4D1 1078 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SPO11Q9Y5K1 396 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 A0A087X0B3 334 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 HIP1O00291 1037 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ASLP04424 464 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 ITGA2BP08514 1039 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 TROVE2P10155 538 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 STIP1P31948 543 aaKnown RBP7.99□□□□□ -1.13
CPNE4-208ENST00000511604 KRT9P35527 623 aa7.99□□□□□ -1.13
CPNE4-208ENST00000511604 HSPA9P38646 679 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms