RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 NIPA1Q7RTP0 329 aa14.65□□□□□ -0.06
COL6A6-203ENST00000511332 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
COL6A6-203ENST00000511332 GIMAP8Q8ND71 665 aaPredicted RBP14.65□□□□□ -0.06
COL6A6-203ENST00000511332 EMID1Q96A84 441 aaPredicted RBP14.65□□□□□ -0.06
COL6A6-203ENST00000511332 TSEN34Q9BSV6 310 aaKnown RBP14.65□□□□□ -0.06
COL6A6-203ENST00000511332 RTEL1Q9NZ71 1219 aa14.65□□□□□ -0.06
COL6A6-203ENST00000511332 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
COL6A6-203ENST00000511332 UBIAD1Q9Y5Z9 338 aa14.65□□□□□ -0.06
COL6A6-203ENST00000511332 WDR81Q562E7 1941 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 SPATA31C2B4DYI2 1134 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 ITGB5P18084 799 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 UBA1P22314 1058 aaKnown RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 USP11P51784 963 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 NEDD9Q14511 834 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 FSCN1Q16658 493 aaKnown RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 LY6KQ17RY6 165 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 GJC2Q5T442 439 aaPredicted RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 NECAB2Q7Z6G3 386 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 DIS3L2Q8IYB7 885 aaKnown RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 KLHDC9Q8NEP7 349 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 TBCKQ8TEA7 893 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
COL6A6-203ENST00000511332 MXRA8Q9BRK3 442 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 C11orf49Q9H6J7 331 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 JADE2Q9NQC1 790 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 MYH15Q9Y2K3 1946 aa14.64□□□□□ -0.07
COL6A6-203ENST00000511332 MYADML2A6NDP7 307 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 GGPS1O95749 300 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 ARHGAP1Q07960 439 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 LAMC2Q13753 1193 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 GNL2Q13823 731 aaKnown RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 GNASQ5JWF2 1037 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 MOXD1Q6UVY6 613 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 UBE2Q1Q7Z7E8 422 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 DHX37Q8IY37 1157 aaKnown RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 OXER1Q8TDS5 423 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 DIS3LQ8TF46 1054 aaKnown RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 NAP1L4Q99733 375 aaKnown RBP14.63□□□□□ -0.07
COL6A6-203ENST00000511332 SENP7Q9BQF6 1050 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 PHF24Q9UPV7 400 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 SCN10AQ9Y5Y9 1956 aa14.63□□□□□ -0.07
COL6A6-203ENST00000511332 MEIS1O00470 390 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 COL6A1P12109 1028 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 GCFC2P16383 781 aaKnown RBP14.62□□□□□ -0.07
COL6A6-203ENST00000511332 CIITAP33076 1130 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 RGS19P49795 217 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 GUCY1B3Q02153 619 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 NR5A1Q13285 461 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 INF2Q27J81 1249 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 CELF3Q5SZQ8 465 aaKnown RBP14.62□□□□□ -0.07
COL6A6-203ENST00000511332 TMEM63BQ5T3F8 832 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 PIK3AP1Q6ZUJ8 805 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 PPTC7Q8NI37 304 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 COPS5Q92905 334 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 TNFRSF25Q93038 417 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 FOXP1Q9H334 677 aaPredicted RBP14.62□□□□□ -0.07
COL6A6-203ENST00000511332 MLXIPQ9HAP2 919 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 KCNH7Q9NS40 1196 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 POLR3EQ9NVU0 708 aa14.62□□□□□ -0.07
COL6A6-203ENST00000511332 MYH9P35579 1960 aaKnown RBP14.62□□□□□ -0.07
COL6A6-203ENST00000511332 IGLV3-22A0A075B6J6 115 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 A0A1W2PQ45 241 aaPredicted RBP14.61□□□□□ -0.07
COL6A6-203ENST00000511332 A0A1W2PQY0 241 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 A6NJR5 290 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 BTBD18B2RXH4 712 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 H3BQV1 296 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
COL6A6-203ENST00000511332 CTAGE5O15320 804 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 KPNA6O60684 536 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 CABYRO75952 493 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 ASGR1P07306 291 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 HSP90AA1P07900 732 aaKnown RBP14.61□□□□□ -0.07
COL6A6-203ENST00000511332 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 KCNA2P16389 499 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 PDCP20941 246 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 PTGS1P23219 599 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 ACLYP53396 1101 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 BEX3Q00994 111 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 KCNA10Q16322 511 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 MYSM1Q5VVJ2 828 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 CCSAPQ6IQ19 270 aaPredicted RBP14.61□□□□□ -0.07
COL6A6-203ENST00000511332 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 SPATA33Q96N06 139 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 SDF4Q9BRK5 362 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 HTATIP2Q9BUP3 242 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 NFASCO94856 1347 aa14.61□□□□□ -0.07
COL6A6-203ENST00000511332 MMP3P08254 477 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 SP2Q02086 613 aa14.6□□□□□ -0.07
COL6A6-203ENST00000511332 DGKDQ16760 1214 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms