RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 IL31Q6EBC2 164 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 IQCEQ6IPM2 695 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 GALNT17Q6IS24 598 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 PPP1R18Q6NYC8 613 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ZNF365Q70YC5 407 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 USP37Q86T82 979 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TDRD5Q8NAT2 981 aaKnown RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TRIB2Q92519 343 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 SKA1Q96BD8 255 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 IFT74Q96LB3 600 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 FAM161BQ96MY7 647 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ASB2Q96Q27 587 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 MEIS3Q99687 375 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 IER2Q9BTL4 223 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 NKX2-4Q9H2Z4 354 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 DCP1AQ9NPI6 582 aaPredicted RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TBC1D22BQ9NU19 505 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 PA2G4Q9UQ80 394 aaKnown RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ZMYM2Q9UBW7 1377 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 DDTLA6NHG4 134 aaPredicted RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ORC4O43929 436 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 NDUFB10O96000 172 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 PDIA4P13667 645 aaKnown RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 SFNP31947 248 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 MCM5P33992 734 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 THPOP40225 353 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 KRT76Q01546 638 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 NFIAQ12857 509 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 AP3B2Q13367 1082 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ALX1Q15699 326 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 GPAT2Q6NUI2 795 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 MAMDC4Q6UXC1 1216 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TMC7Q7Z402 723 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 RABEPKQ7Z6M1 372 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TXNRD3Q86VQ6 643 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 SPICE1Q8N0Z3 855 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 RDM1Q8NG50 284 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ATRIPQ8WXE1 791 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 E2F7Q96AV8 911 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 ZIC5Q96T25 663 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 LRRC27Q9C0I9 530 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 TTC12Q9H892 705 aaPredicted RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 VAT1LQ9HCJ6 419 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 IL1RAPL2Q9NP60 686 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 RBPJLQ9UBG7 517 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 CACNA1FO60840 1977 aa3.23□□□□□ -1.89
CLOCK-209ENST00000511124 MYH14Q7Z406 1995 aaKnown RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 BRCA1P38398 1863 aaKnown RBP3.23□□□□□ -1.89
CLOCK-209ENST00000511124 RGPD2P0DJD1 1756 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 DLEC1Q9Y238 1755 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ASTN2O75129 1339 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC194A0A1B0GVG4 234 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ZNF197O14709 1029 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 RPS6KA5O75582 802 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 COL9A1P20849 921 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SMARCA1P28370 1054 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 TIE1P35590 1138 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 JAK3P52333 1124 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 ITIH3Q06033 890 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SMAD4Q13485 552 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 VEPH1Q14D04 833 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PLCB4Q15147 1175 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC144BQ3MJ40 725 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 UTP14CQ5TAP6 766 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PTCRAQ6ISU1 281 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MTSS1LQ765P7 747 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NPAS4Q8IUM7 802 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 BANK1Q8NDB2 785 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 GPRASP2Q96D09 838 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 BCO2Q9BYV7 579 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CLDND1Q9NY35 253 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 SBF1O95248 1867 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NRCAMQ92823 1304 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 RIOK3O14730 519 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 DDAH1O94760 285 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PGK1P00558 417 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 DESP17661 470 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NAPAP54920 295 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 LRRC32Q14392 662 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC85BQ15834 202 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 INAVAQ3KP66 663 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MAP3K21Q5TCX8 1036 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 TBC1D9Q6ZT07 1266 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC149Q6ZUS6 474 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 FCHSD1Q86WN1 690 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 HERC6Q8IVU3 1022 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 IFNL3Q8IZI9 196 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 NKD2Q969F2 451 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PBXIP1Q96AQ6 731 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC51Q96ER9 411 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 MSANTD3Q96H12 275 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PTPN18Q99952 460 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 OXCT2Q9BYC2 517 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PRDM12Q9H4Q4 367 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 PDLIM7Q9NR12 457 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 THG1LQ9NWX6 298 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 DBR1Q9UK59 544 aaKnown RBP3.22□□□□□ -1.89
CLOCK-209ENST00000511124 EXOC6BQ9Y2D4 811 aa3.22□□□□□ -1.89
CLOCK-209ENST00000511124 TRPV2Q9Y5S1 764 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms