RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
DDX41-211ENST00000510171 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
DDX41-211ENST00000510171 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 WNT8BQ93098 351 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 PDCD2LQ9BRP1 358 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 KRT23Q9C075 422 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 CD320Q9NPF0 282 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
DDX41-211ENST00000510171 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
DDX41-211ENST00000510171 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 PRRC2BQ5JSZ5 2229 aaKnown RBP12.11□□□□□ -0.47
DDX41-211ENST00000510171 RSPH10B2B2RC85 870 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 OPLAHO14841 1288 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 SORBS3O60504 671 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 RGS20O76081 388 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 RSPH10BP0C881 870 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 TGFB3P10600 412 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 HOXD8P13378 290 aaPredicted RBP12.11□□□□□ -0.47
DDX41-211ENST00000510171 KCNA5P22460 613 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 HIC1Q14526 733 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 IMMTQ16891 758 aaKnown RBP12.11□□□□□ -0.47
DDX41-211ENST00000510171 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 SERINC5Q86VE9 423 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 MYOCDQ8IZQ8 938 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 PCDHA1Q9Y5I3 950 aa12.11□□□□□ -0.47
DDX41-211ENST00000510171 LCTP09848 1927 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 FAM86C2PA6NEL3 165 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 GGPS1O95749 300 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 GHRHRQ02643 423 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 PTPROQ16827 1216 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
DDX41-211ENST00000510171 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 GJD3Q8N144 294 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
DDX41-211ENST00000510171 SEPT8Q92599 483 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 ATP6V0A1Q93050 837 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
DDX41-211ENST00000510171 C16orf70Q9BSU1 422 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 DSCC1Q9BVC3 393 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
DDX41-211ENST00000510171 CNNM2Q9H8M5 875 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
DDX41-211ENST00000510171 H3BRB1 525 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 RBAK-RBAKDNI3L0D1 243 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 HIP1O00291 1037 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 ZBTB5O15062 677 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 PPP1R11O60927 126 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 CCND2P30279 289 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 HTRA4P83105 476 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 SP2Q02086 613 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 TRAF1Q13077 416 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 PGM5Q15124 567 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 PUS10Q3MIT2 529 aaKnown RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 FAM178BQ8IXR5 827 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
DDX41-211ENST00000510171 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
DDX41-211ENST00000510171 GBF1Q92538 1859 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 SCN5AQ14524 2016 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
DDX41-211ENST00000510171 SMIM10L2AP0DMW4 78 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 SMIM10L2BP0DMW5 78 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 UBA1P22314 1058 aaKnown RBP12.08□□□□□ -0.48
DDX41-211ENST00000510171 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
DDX41-211ENST00000510171 EPC2Q52LR7 807 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 CHD1LQ86WJ1 897 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 PLEKHM2Q8IWE5 1019 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
DDX41-211ENST00000510171 ZFP91Q96JP5 570 aaPredicted RBP12.08□□□□□ -0.48
DDX41-211ENST00000510171 TCF20Q9UGU0 1960 aaKnown RBP12.08□□□□□ -0.48
DDX41-211ENST00000510171 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
DDX41-211ENST00000510171 NOP56O00567 594 aaKnown RBP12.07□□□□□ -0.48
DDX41-211ENST00000510171 TREHO43280 583 aa12.07□□□□□ -0.48
DDX41-211ENST00000510171 CAND2O75155 1236 aa12.07□□□□□ -0.48
DDX41-211ENST00000510171 UPP2O95045 317 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms