RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
RNF4-213ENST00000509388 NKRFO15226 690 aaKnown RBP eCLIP16.82■□□□□ 0.28
RNF4-213ENST00000509388 RGS20O76081 388 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 F13A1P00488 732 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 ARP10275 920 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 CCL5P13501 91 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 MCM7P33993 719 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 RESTQ13127 1097 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 PKP1Q13835 747 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 NEDD9Q14511 834 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 ZNF174Q15697 407 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 Q4G0T1 1027 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
RNF4-213ENST00000509388 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 ZNF577Q9BSK1 485 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 AP5M1Q9H0R1 490 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 UNC93B1Q9H1C4 597 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 DDX20Q9UHI6 824 aaKnown RBP16.82■□□□□ 0.28
RNF4-213ENST00000509388 TCEAL9Q9UHQ7 104 aa16.82■□□□□ 0.28
RNF4-213ENST00000509388 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
RNF4-213ENST00000509388 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 NEMFO60524 1076 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 BRD1O95696 1058 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 SMPD1P17405 629 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 ORC2Q13416 577 aaPredicted RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 MTFR1Q15390 333 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 LY6KQ17RY6 165 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 DUSP28Q4G0W2 176 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 SDF4Q9BRK5 362 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 TMEM106CQ9BVX2 250 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 AGO4Q9HCK5 861 aaKnown RBP16.81■□□□□ 0.28
RNF4-213ENST00000509388 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
RNF4-213ENST00000509388 PLXNA1Q9UIW2 1896 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 GH1P01241 217 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 MYCNP04198 464 aaPredicted RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
RNF4-213ENST00000509388 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
RNF4-213ENST00000509388 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
RNF4-213ENST00000509388 MSH4O15457 936 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 SLC37A4O43826 429 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 EDIL3O43854 480 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 SORBS3O60504 671 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 ARIH2O95376 493 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 GGPS1O95749 300 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
RNF4-213ENST00000509388 TOB1P50616 345 aaPredicted RBP16.79■□□□□ 0.28
RNF4-213ENST00000509388 LAMC2Q13753 1193 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 CALCRLQ16602 461 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
RNF4-213ENST00000509388 FAM173BQ6P4H8 233 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
RNF4-213ENST00000509388 SLFN12Q8IYM2 578 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 MBOAT7Q96N66 472 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 UIMC1Q96RL1 719 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 XPNPEP3Q9NQH7 507 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 Q9Y3F1 56 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 PCDHB6Q9Y5E3 794 aa16.79■□□□□ 0.28
RNF4-213ENST00000509388 NOP56O00567 594 aaKnown RBP16.78■□□□□ 0.28
RNF4-213ENST00000509388 TBX3O15119 743 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 ATP9AO75110 1047 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 SP2Q02086 613 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 SEMA3FQ13275 785 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 NBR1Q14596 966 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 CELF3Q5SZQ8 465 aaKnown RBP16.78■□□□□ 0.28
RNF4-213ENST00000509388 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 TLK2Q86UE8 772 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 COPS5Q92905 334 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 LENG9Q96B70 501 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 FAM20AQ96MK3 541 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
RNF4-213ENST00000509388 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
RNF4-213ENST00000509388 LCTP09848 1927 aa16.78■□□□□ 0.28
RNF4-213ENST00000509388 DDX39AO00148 427 aaKnown RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 GAS7O60861 476 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 BMP15O95972 392 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 KCNA2P16389 499 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 DDIT3P35638 169 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 SP4Q02446 784 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms