RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 NSUN6Q8TEA1 469 aaKnown RBP11.95□□□□□ -0.5
COPS4-207ENST00000509317 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
COPS4-207ENST00000509317 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
COPS4-207ENST00000509317 BCAS3Q9H6U6 928 aa11.95□□□□□ -0.5
COPS4-207ENST00000509317 CLDND1Q9NY35 253 aa11.95□□□□□ -0.5
COPS4-207ENST00000509317 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
COPS4-207ENST00000509317 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
COPS4-207ENST00000509317 NEDD4P46934 1319 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 RGS20O76081 388 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 AMHP03971 560 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPS4-207ENST00000509317 IRS1P35568 1242 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 LTBRP36941 435 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 SP2Q02086 613 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 ALX1Q15699 326 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 STXBP2Q15833 593 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 HSDL1Q3SXM5 330 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 ARHGEF16Q5VV41 709 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 IL31RAQ8NI17 732 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 MUTYHQ9UIF7 546 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 SIP14410 1827 aa11.94□□□□□ -0.5
COPS4-207ENST00000509317 MYO7AQ13402 2215 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 RSPH10B2B2RC85 870 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 B4DLN1 442 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 H3BNC9 293 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 OPLAHO14841 1288 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 EFCAB14O75071 495 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 NR3C2P08235 984 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 RSPH10BP0C881 870 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 MYCLP12524 364 aaPredicted RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 PTPROQ16827 1216 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 PLEKHG4Q58EX7 1191 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 RPAINQ86UA6 219 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 TMEM192Q8IY95 271 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 PPTC7Q8NI37 304 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 PABPC5Q96DU9 382 aaKnown RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 PXMP2Q9NR77 195 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 TELO2Q9Y4R8 837 aa11.93□□□□□ -0.5
COPS4-207ENST00000509317 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
COPS4-207ENST00000509317 ABCB11O95342 1321 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 SALL3Q9BXA9 1300 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 LINC01565O15544 149 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 TREHO43280 583 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 GGPS1O95749 300 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 CFBP00751 764 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 HSPD1P10809 573 aaKnown RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 NMIQ13287 307 aaPredicted RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 TIGD5Q53EQ6 642 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 FBXO11Q86XK2 927 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 SPATA33Q96N06 139 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 C16orf70Q9BSU1 422 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
COPS4-207ENST00000509317 IFIH1Q9BYX4 1025 aaKnown RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
COPS4-207ENST00000509317 CFAP54Q96N23 3096 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 GRM6O15303 877 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
COPS4-207ENST00000509317 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
COPS4-207ENST00000509317 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
COPS4-207ENST00000509317 HYAL1Q12794 435 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 COL19A1Q14993 1142 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
COPS4-207ENST00000509317 IER5LQ5T953 404 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 MFSD6Q6ZSS7 791 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 ADHFE1Q8IWW8 467 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 TOP1MTQ969P6 601 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 IWS1Q96ST2 819 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 IGFLR1Q9H665 355 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 HELLSQ9NRZ9 838 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 PNMA2Q9UL42 364 aa11.91□□□□□ -0.5
COPS4-207ENST00000509317 EMSYQ7Z589 1322 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 PPP1R11O60927 126 aaPredicted RBP11.9□□□□□ -0.5
COPS4-207ENST00000509317 TBX10O75333 385 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 SMIM10L2AP0DMW4 78 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 SMIM10L2BP0DMW5 78 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 UBA1P22314 1058 aaKnown RBP11.9□□□□□ -0.5
COPS4-207ENST00000509317 CTNNB1P35222 781 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
COPS4-207ENST00000509317 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
COPS4-207ENST00000509317 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
COPS4-207ENST00000509317 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms