RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 PERM1Q5SV97 790 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ELMSAN1Q6PJG2 1045 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 CHSY3Q70JA7 882 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 Q7L0L9 218 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 GPRC5AQ8NFJ5 357 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 NXPE3Q969Y0 559 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 PLD4Q96BZ4 506 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 GUCD1Q96NT3 240 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 NSUN5Q96P11 429 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 OSMRQ99650 979 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 DUSP9Q99956 384 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZKSCAN3Q9BRR0 538 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ASCC2Q9H1I8 757 aaPredicted RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 DHX36Q9H2U1 1008 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 C12orf49Q9H741 205 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 COPRSQ9NQ92 184 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 DDX4Q9NQI0 724 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 KANSL3Q9P2N6 904 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 PARP2Q9UGN5 583 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 NAGPAQ9UK23 515 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 STARD13Q9Y3M8 1113 aa5.36□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZNF521Q96K83 1311 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SORBS3O60504 671 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LILRB5O75023 590 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 ARHGEF15O94989 841 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 ASNSP08243 561 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 HOXC6P09630 235 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZKSCAN1P17029 563 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SYN1P17600 705 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 EIF4BP23588 611 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 GSTT1P30711 240 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 BTDP43251 543 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 PHKA1P46020 1223 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 HERVK_113P62684 666 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 GSTO1P78417 241 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SMAD3P84022 425 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 CACNB2Q08289 660 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 PDE3AQ14432 1141 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SNX17Q15036 470 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LRRC26Q2I0M4 334 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 ALDH1L2Q3SY69 923 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZNF385CQ66K41 422 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 PSAPL1Q6NUJ1 521 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LBX2Q6XYB7 198 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 C1orf229Q6ZS94 237 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 DZIP1Q86YF9 867 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 FOXP4Q8IVH2 680 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 MAP4K3Q8IVH8 894 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 MICALL1Q8N3F8 863 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 DTWD1Q8N5C7 304 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 GLIS3Q8NEA6 775 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 KLHDC4Q8TBB5 520 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 EPS8L3Q8TE67 593 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LPAR1Q92633 364 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 WNT8BQ93098 351 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 C12orf42Q96LP6 360 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 TCF12Q99081 682 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 APBA2Q99767 749 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 BCO2Q9BYV7 579 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 EHD4Q9H223 541 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 LIN7BQ9HAP6 207 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 PI4KBQ9UBF8 816 aa5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SPTBN5Q9NRC6 3674 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-213ENST00000509112 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 DNM1LO00429 736 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 GADD45BO75293 160 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 GLRX3O76003 335 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 CPB1P15086 417 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 CYP2B6P20813 491 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 DGKGP49619 791 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 ST13P50502 369 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 HMGCS2P54868 508 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 ERVK-24P63145 666 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 CCNA1P78396 465 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 IRX3P78415 501 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 MECOMQ03112 1051 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 PSMD2Q13200 908 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 GRM2Q14416 872 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 CCDC184Q52MB2 194 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 TMED8Q6PL24 325 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 GPR142Q7Z601 462 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 PLEKHH3Q7Z736 793 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 ZNF384Q8TF68 577 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 FOXD4L4Q8WXT5 416 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 BSNDQ8WZ55 320 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 NSUN4Q96CB9 384 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 P2RX7Q99572 595 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 LBHD1Q9BQE6 289 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 SMG9Q9H0W8 520 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 MRS2Q9HD23 443 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 ABCB6Q9NP58 842 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 TMOD4Q9NZQ9 345 aa5.34□□□□□ -1.55
CALCOCO2-213ENST00000509112 RBPJLQ9UBG7 517 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms