RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 PXMP2Q9NR77 195 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 MRPL11Q9Y3B7 192 aaKnown RBP18.67■□□□□ 0.58
CXCL1-202ENST00000509101 PIEZO1Q92508 2521 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 KDM4AO75164 1064 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 EIF3JO75822 258 aaKnown RBP18.66■□□□□ 0.58
CXCL1-202ENST00000509101 NR3C2P08235 984 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 IL9P15248 144 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 HIC1Q14526 733 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 IQCA1Q86XH1 822 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 FAM178BQ8IXR5 827 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.66■□□□□ 0.58
CXCL1-202ENST00000509101 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 INSL6Q9Y581 213 aa18.66■□□□□ 0.58
CXCL1-202ENST00000509101 AMHP03971 560 aa18.65■□□□□ 0.58
CXCL1-202ENST00000509101 SSTR3P32745 418 aaPredicted RBP18.65■□□□□ 0.58
CXCL1-202ENST00000509101 GJD3Q8N144 294 aa18.65■□□□□ 0.58
CXCL1-202ENST00000509101 RILPL2Q969X0 211 aa18.65■□□□□ 0.58
CXCL1-202ENST00000509101 EMSYQ7Z589 1322 aa18.65■□□□□ 0.58
CXCL1-202ENST00000509101 B4E1Z4 1266 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 ZNF213O14771 459 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 OPLAHO14841 1288 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 MYCLP12524 364 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 THPOP40225 353 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 CCDC178Q5BJE1 867 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 PTCRAQ6ISU1 281 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 ENAHQ8N8S7 591 aaPredicted RBP18.64■□□□□ 0.57
CXCL1-202ENST00000509101 DBF4BQ8NFT6 615 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 JMJD4Q9H9V9 463 aa18.64■□□□□ 0.57
CXCL1-202ENST00000509101 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 RGS20O76081 388 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 GGPS1O95749 300 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 HSD17B4P51659 736 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
CXCL1-202ENST00000509101 MKRN4PQ13434 485 aaPredicted RBP18.63■□□□□ 0.57
CXCL1-202ENST00000509101 MYSM1Q5VVJ2 828 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 SERINC5Q86VE9 423 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 TICAM2Q86XR7 235 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
CXCL1-202ENST00000509101 MRPL38Q96DV4 380 aaKnown RBP18.63■□□□□ 0.57
CXCL1-202ENST00000509101 SPATA33Q96N06 139 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 ZSCAN10Q96SZ4 725 aaPredicted RBP18.63■□□□□ 0.57
CXCL1-202ENST00000509101 PDCD2LQ9BRP1 358 aa18.63■□□□□ 0.57
CXCL1-202ENST00000509101 PRR33A8MZF0 331 aa18.62■□□□□ 0.57
CXCL1-202ENST00000509101 H3BQ06 376 aaPredicted RBP18.62■□□□□ 0.57
CXCL1-202ENST00000509101 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
CXCL1-202ENST00000509101 IL31RAQ8NI17 732 aa18.62■□□□□ 0.57
CXCL1-202ENST00000509101 ANKS1AQ92625 1134 aa18.62■□□□□ 0.57
CXCL1-202ENST00000509101 AMNQ9BXJ7 453 aa18.62■□□□□ 0.57
CXCL1-202ENST00000509101 BAZ2BQ9UIF8 2168 aaKnown RBP18.61■□□□□ 0.57
CXCL1-202ENST00000509101 PPFIA4O75335 1185 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 PTPROQ16827 1216 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 EPC2Q52LR7 807 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 TIGD5Q53EQ6 642 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 PLEKHG4Q58EX7 1191 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 CELF3Q5SZQ8 465 aaKnown RBP18.61■□□□□ 0.57
CXCL1-202ENST00000509101 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 CTNNA3Q9UI47 895 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 MYO7AQ13402 2215 aa18.61■□□□□ 0.57
CXCL1-202ENST00000509101 C17orf102A2RUQ5 167 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 GRXCR2A6NFK2 248 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 PPP1R11O60927 126 aaPredicted RBP18.6■□□□□ 0.57
CXCL1-202ENST00000509101 CTSHP09668 335 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 SDSP20132 328 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 HOXA13P31271 388 aaPredicted RBP18.6■□□□□ 0.57
CXCL1-202ENST00000509101 NT5C2P49902 561 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 SP2Q02086 613 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 GHRHRQ02643 423 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 PGM5Q15124 567 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 KCNV1Q6PIU1 500 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 EP400NLQ6ZTU2 488 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 NEK9Q8TD19 979 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
CXCL1-202ENST00000509101 ATP6V0A1Q93050 837 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
CXCL1-202ENST00000509101 SAMD11Q96NU1 681 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 C16orf70Q9BSU1 422 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 KAT6AQ92794 2004 aa18.6■□□□□ 0.57
CXCL1-202ENST00000509101 UPP2O95045 317 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 GPM6BQ13491 265 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 TCEAL5Q5H9L2 206 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 ALYREFQ86V81 257 aaKnown RBP18.59■□□□□ 0.57
CXCL1-202ENST00000509101 BANK1Q8NDB2 785 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 SEPT8Q92599 483 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 OSBPL7Q9BZF2 842 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 MLXIPQ9HAP2 919 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 ZSWIM5Q9P217 1185 aa18.59■□□□□ 0.57
CXCL1-202ENST00000509101 C5orf42Q9H799 3197 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms