RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 GTPBP3Q969Y2 492 aaKnown RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 PAG1Q9NWQ8 432 aa10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-206ENST00000508809 MCM3APO60318 1980 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 M0R2N6 131 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 AKR1A1P14550 325 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 CTR9Q6PD62 1173 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 HAUS7Q99871 368 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 BOLA2Q9H3K6 86 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 KIAA1024Q9UPX6 916 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 CHD9Q3L8U1 2897 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 SYNGAP1Q96PV0 1343 aa10.32□□□□□ -0.76
COL4A3BP-206ENST00000508809 CHD7Q9P2D1 2997 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 DNAJC25-GNG10A0A024R161 153 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 SNAI1O95863 264 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 CHGBP05060 677 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 RAG1P15918 1043 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 CDK7P50613 346 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 ACLYP53396 1101 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 TMEM39AQ9NV64 488 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 CNPY2Q9Y2B0 182 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 ELP1O95163 1332 aa10.31□□□□□ -0.76
COL4A3BP-206ENST00000508809 DCDC2CA8MYV0 355 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 PQBP1O60828 265 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 DUSP11O75319 330 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 HMMRO75330 724 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 TIMP1P01033 207 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 FOSL2P15408 326 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 CST5P28325 142 aaPredicted RBP10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 SEC13P55735 322 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 FPGSQ05932 587 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 KCNA10Q16322 511 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 SBK1Q52WX2 424 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 FAM83BQ5T0W9 1011 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 RASIP1Q5U651 963 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 FIGNL1Q6PIW4 674 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 PUS7LQ9H0K6 701 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 RUBCNLQ9H714 662 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 PRDM6Q9NQX0 595 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 STARD7Q9NQZ5 370 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 NYAP2Q9P242 653 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 TBX21Q9UL17 535 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 SLC4A4Q9Y6R1 1079 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 XIRP2A4UGR9 3374 aa10.3□□□□□ -0.76
COL4A3BP-206ENST00000508809 MYH4Q9Y623 1939 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 F5H6K3 240 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 NKX3-2P78367 333 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 KLRC3Q07444 240 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 GIMAP6Q6P9H5 292 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 C16orf59Q7L2K0 433 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 MKL1Q969V6 931 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 LENG1Q96BZ8 264 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 CCDC97Q96F63 343 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 SYNRGQ9UMZ2 1314 aa10.29□□□□□ -0.76
COL4A3BP-206ENST00000508809 REV3LO60673 3130 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 GSG1L2A8MUP6 293 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 NDUFB10O96000 172 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 GJA9P57773 515 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 ACVR2BQ13705 512 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 TMEM240Q5SV17 173 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 SNRNP48Q6IEG0 339 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 PCSK9Q8NBP7 692 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 FGD4Q96M96 766 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 ABHD16BQ9H3Z7 469 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
COL4A3BP-206ENST00000508809 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms