RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PRR23AA6NEV1 266 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 HTRA4P83105 476 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 ALX1Q15699 326 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 DGKDQ16760 1214 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 RNF135Q8IUD6 432 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 C7orf31Q8N865 590 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 EDAQ92838 391 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 TTC14Q96N46 770 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 SAMD11Q96NU1 681 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 KATNAL1Q9BW62 490 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
NEDD9-211ENST00000508546 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 FAM50BQ9Y247 325 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 ACACBO00763 2458 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
NEDD9-211ENST00000508546 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 PROB1E7EW31 1015 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 HAS3O00219 553 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 LGR5O75473 907 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 F2P00734 622 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 PSEN2P49810 448 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 MBTPS1Q14703 1052 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 PTPROQ16827 1216 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 ZNF618Q5T7W0 954 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 TRIM67Q6ZTA4 783 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 FBXL6Q8N531 539 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 NSUN6Q8TEA1 469 aaKnown RBP11.02□□□□□ -0.65
NEDD9-211ENST00000508546 PABPC5Q96DU9 382 aaKnown RBP11.02□□□□□ -0.65
NEDD9-211ENST00000508546 IWS1Q96ST2 819 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 PKD1L2Q7Z442 2459 aa11.02□□□□□ -0.65
NEDD9-211ENST00000508546 AMHP03971 560 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-211ENST00000508546 MFSD10Q14728 455 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 STXBP2Q15833 593 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
NEDD9-211ENST00000508546 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
NEDD9-211ENST00000508546 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-211ENST00000508546 WNT8BQ93098 351 aa11.01□□□□□ -0.65
NEDD9-211ENST00000508546 DDX41Q9UJV9 622 aaKnown RBP11.01□□□□□ -0.65
NEDD9-211ENST00000508546 H0Y858 1186 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 H3BNC9 293 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 PCP11498 1178 aaKnown RBP11□□□□□ -0.65
NEDD9-211ENST00000508546 LAMC2Q13753 1193 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 PKN1Q16512 942 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 USH1GQ495M9 461 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
NEDD9-211ENST00000508546 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 MYOCDQ8IZQ8 938 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 BANK1Q8NDB2 785 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 DBF4BQ8NFT6 615 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 TBC1D5Q92609 795 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 TAAR1Q96RJ0 339 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 RMDN3Q96TC7 470 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 ALG1Q9BT22 464 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 TLR9Q9NR96 1032 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 TOMM22Q9NS69 142 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 COL20A1Q9P218 1284 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 TRPC6Q9Y210 931 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 ABCB11O95342 1321 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 LAMA4Q16363 1823 aa11□□□□□ -0.65
NEDD9-211ENST00000508546 NCK2O43639 380 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 PPFIA4O75335 1185 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
NEDD9-211ENST00000508546 FGAP02671 866 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 GPM6BQ13491 265 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 SMAD2Q15796 467 aaKnown RBP10.99□□□□□ -0.65
NEDD9-211ENST00000508546 CLUL1Q15846 466 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 TCEAL5Q5H9L2 206 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 SERINC5Q86VE9 423 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 TOP1MTQ969P6 601 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 POP1Q99575 1024 aaKnown RBP10.99□□□□□ -0.65
NEDD9-211ENST00000508546 NSUN3Q9H649 340 aaKnown RBP10.99□□□□□ -0.65
NEDD9-211ENST00000508546 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 ZMYM6O95789 1325 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 MAP1BP46821 2468 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms