RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MRPS9P82933 396 aaKnown RBP22.8■■□□□ 1.24
SFXN1-209ENST00000508290 CELF3Q5SZQ8 465 aaKnown RBP22.8■■□□□ 1.24
SFXN1-209ENST00000508290 MYSM1Q5VVJ2 828 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 CPLX2Q6PUV4 134 aaKnown RBP22.8■■□□□ 1.24
SFXN1-209ENST00000508290 BADQ92934 168 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 SENP7Q9BQF6 1050 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 ALDH8A1Q9H2A2 487 aaPredicted RBP22.8■■□□□ 1.24
SFXN1-209ENST00000508290 PDRG1Q9NUG6 133 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 KIAA1217Q5T5P2 1943 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 GRIN2DO15399 1336 aa22.8■■□□□ 1.24
SFXN1-209ENST00000508290 RANBP2P49792 3224 aaKnown RBP22.79■■□□□ 1.24
SFXN1-209ENST00000508290 STXBP3O00186 592 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 UBA1P22314 1058 aaKnown RBP22.79■■□□□ 1.24
SFXN1-209ENST00000508290 TOB2Q14106 344 aaPredicted RBP22.79■■□□□ 1.24
SFXN1-209ENST00000508290 ANKRD1Q15327 319 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 TRIM22Q8IYM9 498 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 FAM177A1Q8N128 213 aaPredicted RBP22.79■■□□□ 1.24
SFXN1-209ENST00000508290 GPRASP2Q96D09 838 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 UPF3BQ9BZI7 483 aaKnown RBP22.79■■□□□ 1.24
SFXN1-209ENST00000508290 MLXIPQ9HAP2 919 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 PCDHA6Q9UN73 950 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 PCDHA8Q9Y5H6 950 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 LTBP2Q14767 1821 aa22.79■■□□□ 1.24
SFXN1-209ENST00000508290 TRIOBPQ9H2D6 2365 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 SMCO2A6NFE2 343 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 GGPS1O95749 300 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 PSMC6P62333 389 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 FPGSQ05932 587 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 SESTD1Q86VW0 696 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 TMEM199Q8N511 208 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 CCDC148Q8NFR7 591 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 SPATA33Q96N06 139 aa22.78■■□□□ 1.24
SFXN1-209ENST00000508290 CPLX1O14810 134 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 GNA11P29992 359 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 NTRK3Q16288 839 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 NBPF20Q3BBV1 942 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 GPR153Q6NV75 609 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 METTL7BQ6UX53 244 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 C6orf50Q9HD87 102 aa22.77■■□□□ 1.24
SFXN1-209ENST00000508290 F2P00734 622 aa22.76■■□□□ 1.23
SFXN1-209ENST00000508290 PPIGQ13427 754 aaKnown RBP eCLIP22.76■■□□□ 1.23
SFXN1-209ENST00000508290 UBE2SQ16763 222 aa22.76■■□□□ 1.23
SFXN1-209ENST00000508290 BICD2Q8TD16 824 aa22.76■■□□□ 1.23
SFXN1-209ENST00000508290 ZMYND12Q9H0C1 365 aa22.76■■□□□ 1.23
SFXN1-209ENST00000508290 NOP56O00567 594 aaKnown RBP22.75■■□□□ 1.23
SFXN1-209ENST00000508290 B4GALT4O60513 344 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 CDKL5O76039 1030 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 FAM47CQ5HY64 1035 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 TYW1BQ6NUM6 668 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 HIPK3Q9H422 1215 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 SH3GLB2Q9NR46 395 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 RTEL1Q9NZ71 1219 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 UBIAD1Q9Y5Z9 338 aa22.75■■□□□ 1.23
SFXN1-209ENST00000508290 ITGB8P26012 769 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 CLK2P49760 499 aaKnown RBP22.74■■□□□ 1.23
SFXN1-209ENST00000508290 SP2Q02086 613 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 MTMR1Q13613 665 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 HSDL1Q3SXM5 330 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 SLC26A6Q9BXS9 759 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 SCN10AQ9Y5Y9 1956 aa22.74■■□□□ 1.23
SFXN1-209ENST00000508290 SREBF1P36956 1147 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 CCT2P78371 535 aaKnown RBP22.73■■□□□ 1.23
SFXN1-209ENST00000508290 PKN1Q16512 942 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 REXO1Q8N1G1 1221 aaKnown RBP22.73■■□□□ 1.23
SFXN1-209ENST00000508290 C7orf31Q8N865 590 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 PHKBQ93100 1093 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 ANO3Q9BYT9 981 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 TRPV6Q9H1D0 765 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 JADE2Q9NQC1 790 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 NOD1Q9Y239 953 aa22.73■■□□□ 1.23
SFXN1-209ENST00000508290 PITPNM1O00562 1244 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 DEXIO95424 95 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 ITGB5P18084 799 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 SSRP1Q08945 709 aaKnown RBP22.72■■□□□ 1.23
SFXN1-209ENST00000508290 SEMA3FQ13275 785 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 PSRC1Q6PGN9 363 aaPredicted RBP22.72■■□□□ 1.23
SFXN1-209ENST00000508290 CCDC155Q8N6L0 562 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 KAT2BQ92831 832 aa22.72■■□□□ 1.23
SFXN1-209ENST00000508290 NOC4LQ9BVI4 516 aaKnown RBP22.72■■□□□ 1.23
SFXN1-209ENST00000508290 HAS3O00219 553 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 PSEN2P49810 448 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 BFSP2Q13515 415 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 MFSD10Q14728 455 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 CYFIP1Q7L576 1253 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 NIPA1Q7RTP0 329 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 MXRA8Q9BRK3 442 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 PPP1R12CQ9BZL4 782 aa22.71■■□□□ 1.23
SFXN1-209ENST00000508290 SLKQ9H2G2 1235 aaPredicted RBP22.71■■□□□ 1.23
SFXN1-209ENST00000508290 NCOA5Q9HCD5 579 aaKnown RBP22.71■■□□□ 1.23
SFXN1-209ENST00000508290 TRMT13Q9NUP7 481 aaKnown RBP22.71■■□□□ 1.23
SFXN1-209ENST00000508290 ZNF215Q9UL58 517 aaPredicted RBP22.71■■□□□ 1.23
SFXN1-209ENST00000508290 PFKMP08237 780 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 KIAA0753Q2KHM9 967 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 CEP55Q53EZ4 464 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 RPUSD2Q8IZ73 545 aaKnown RBP22.7■■□□□ 1.22
SFXN1-209ENST00000508290 CAGE1Q8TC20 777 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
SFXN1-209ENST00000508290 C22orf23Q9BZE7 217 aa22.7■■□□□ 1.22
SFXN1-209ENST00000508290 MTIF3Q9H2K0 278 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms